Gene Information

Name : LCGT_1556 (LCGT_1556)
Accession : YP_004779733.1
Strain : Lactococcus garvieae ATCC 49156
Genome accession: NC_015930
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1526409 - 1527089 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence :
ATGAAAGATATTCTACATATGGATAAAGTCACAAAGAGCTTTGGTAAGGGGCGCACAGAAGTTCAAGCCTTGAAAGGTAT
TGACCTACGGGTGCAAGCTGGGGAGTTTATCTCAATCATTGGTCCTTCAGGCTCTGGTAAAAGTACTTTCCTAACAATTG
CTGGGGGGCTTCAGTCTTCAACAACAGGGACAACAAAAATCAATACGATTGATTTTAATAAATTATCAGAAAAAGAACGC
TCAAAAGTAAGATTTAAAGAAGTTGGGTTTATCTTGCAAGCTTCGAATCTAATTCCTTATTTGACGGTCAAAGAACAGTT
GAAACTTGTGGATAAAATAAATAAAAAGAACATCAATCGAGGAAAAATAGACGAAATGCTTGACTCCTTAGATATTTTGG
AGCTACAAGATAAATACCCTGGGGAACTCTCTGGTGGTGAACGTCAACGTGTTGCAATCACACGTGCACTCTATAATGAT
CCAAGTTTGATTTTAGCTGATGAACCAACAGCCAGCCTAGATACAGAAAGGGCTTATCAGGTTGTGGATATTTTGAGAAA
AGAAGCGCATGAAAAAAATAAAGCCACTATTATGGTAACGCATGATTCGCGGATGATAAAAAATAGTGACAGCGTCTATC
GGATCGAAGACGGAAACCTCTTTAAGGTAGACAATCCTTGA

Protein sequence :
MKDILHMDKVTKSFGKGRTEVQALKGIDLRVQAGEFISIIGPSGSGKSTFLTIAGGLQSSTTGTTKINTIDFNKLSEKER
SKVRFKEVGFILQASNLIPYLTVKEQLKLVDKINKKNINRGKIDEMLDSLDILELQDKYPGELSGGERQRVAITRALYND
PSLILADEPTASLDTERAYQVVDILRKEAHEKNKATIMVTHDSRMIKNSDSVYRIEDGNLFKVDNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-43 49
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 1e-36 47
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-26 41