Gene Information

Name : LCGT_1519 (LCGT_1519)
Accession : YP_004779696.1
Strain : Lactococcus garvieae ATCC 49156
Genome accession: NC_015930
Putative virulence/resistance : Resistance
Product : rifampin ADP-ribosyl transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1494486 - 1494899 bp
Length : 414 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAAAAGTACATGATGAAGGTCCTTTCTACCACGGGACGAAAGCCGAACTCAAAATAGGGGATTATTTAAGGGCGGG
TTTTGTCTCTAATTATGATTCACGTGTGACCATGAATCATATCTATTTTACAGCTTTAAAAGATGGTGCTGGCTTTGCTG
CCCAAATTGCTGCTGGAAAAGCTGAGGTGCCACATGTCTATCTGGTGGAACCAACAGGTCCTTATGAAAATGATCCCAAT
GTCACCGATAAAAAATTCTCAGGTAATCCCACACGTTCATATCGCTCTACTGCACCTTTAAAAGTAATTGCTGAGGTGAC
CGATTGGACGCGACAACCTCAAGATAAGATTGACATTTTACGGAAAAAAATTACCACACGTGCGACAAACAGTAAAACAG
CCATTATTAATTAA

Protein sequence : 
MEKVHDEGPFYHGTKAELKIGDYLRAGFVSNYDSRVTMNHIYFTALKDGAGFAAQIAAGKAEVPHVYLVEPTGPYENDPN
VTDKKFSGNPTRSYRSTAPLKVIAEVTDWTRQPQDKIDILRKKITTRATNSKTAIIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arr-2 CAJ77045.1 Rifampin ADP-ribosylating transferase Not tested AbaR1 Protein 9e-25 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LCGT_1519 YP_004779696.1 rifampin ADP-ribosyl transferase AL939114.1.orf1.gene Protein 2e-33 62
LCGT_1519 YP_004779696.1 rifampin ADP-ribosyl transferase AF001493.1.orf0.gene Protein 1e-20 45
LCGT_1519 YP_004779696.1 rifampin ADP-ribosyl transferase FM897214.1.orf2.gene Protein 3e-23 44
LCGT_1519 YP_004779696.1 rifampin ADP-ribosyl transferase NC_010410.6003052.p0 Protein 4e-25 44