Gene Information

Name : LCGT_1511 (LCGT_1511)
Accession : YP_004779688.1
Strain : Lactococcus garvieae ATCC 49156
Genome accession: NC_015930
Putative virulence/resistance : Virulence
Product : manganese ABC transporter substrate-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 1487809 - 1488738 bp
Length : 930 bp
Strand : +
Note : -

DNA sequence :
ATGAACCGCAAACAGCTCTCTTTAATTGCCCTTTTAGCTTCACTTCTGTTGCTTCTTACAGCATGCTTGCCTAAAAAAGA
AGAAAGTATGGCATCTGATAAACTTAAGGTTGTAACTACCTACTCCATCATTGCTGATATTGCCGAAAATATCGGGAAGG
ACCATGTTGATGTTTATAGCATGGTGCCACGTGGCACGGATCCTCATCAGTACGATCCGAAACCCAATGACACTCAAGCA
GTTGAAAAAGCCGACCTTGTCTTTTACAATGGCCTCAATTTGGAAACTGGAAAAGGTTGGTTTGATAAGCTGATTAAAAA
TAGTCGTAAAGAAGATTCAACCTTTATGGTTAGCCAAGGTGTTACTCCCATTCACTTAAGTGAAAAAGGCAAAGAAAGTG
AAGAAGACCCGCATGCTTGGCTTAATATTCAAAACGGCATTATTTATGCCCAAAATATCGAAAAAGAACTTTCAAAGAAA
GATCCTCAGCATAAAGAAGATTATCAAAAAAATCTCAAAGCATATACGGATAAGTTGCAACAGCTGGACACAGAAGCAAA
AGCTAAGATTGCAACCATTCTGGAGGAAGACCGAATCTTGGTTACCAGTGAAGGTGCTTTTAAGTACTTCTCAAAACAAT
ACGGCCTTACAGCTGAATATATCTGGGAAATCAATACAGACAACCAAGGTACACCAGCCCAACTCAACCGTATCAACACG
ATTGTTAAAGATAAAAATGTAAAAGCACTCTTTGTGGAAACCAGCGTTTCACCAAAAACAATGGAATCTGTCTCTAGACA
AACCGGTGTCAAAATCTACTCGAAAATCTTTACTGATTCACTTGCTGACAAAGGTCAGAAAGGTGACACCTATTACGATA
TGCTCAAATGGAATATTGAGCATATCACTGATGGGTTAAGTGGTAGGTAA

Protein sequence :
MNRKQLSLIALLASLLLLLTACLPKKEESMASDKLKVVTTYSIIADIAENIGKDHVDVYSMVPRGTDPHQYDPKPNDTQA
VEKADLVFYNGLNLETGKGWFDKLIKNSRKEDSTFMVSQGVTPIHLSEKGKESEEDPHAWLNIQNGIIYAQNIEKELSKK
DPQHKEDYQKNLKAYTDKLQQLDTEAKAKIATILEEDRILVTSEGAFKYFSKQYGLTAEYIWEINTDNQGTPAQLNRINT
IVKDKNVKALFVETSVSPKTMESVSRQTGVKIYSKIFTDSLADKGQKGDTYYDMLKWNIEHITDGLSGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 2e-75 53
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 2e-75 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LCGT_1511 YP_004779688.1 manganese ABC transporter substrate-binding protein VFG2157 Protein 2e-76 53
LCGT_1511 YP_004779688.1 manganese ABC transporter substrate-binding protein VFG1359 Protein 6e-76 52
LCGT_1511 YP_004779688.1 manganese ABC transporter substrate-binding protein VFG2165 Protein 2e-70 52