Gene Information

Name : LCGT_0984 (LCGT_0984)
Accession : YP_004779161.1
Strain : Lactococcus garvieae ATCC 49156
Genome accession: NC_015930
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 1012733 - 1013878 bp
Length : 1146 bp
Strand : -
Note : -

DNA sequence :
ATGAAATTAAAAACAAAGATGATTCACGGTGGCATCAGTGAAGATGCTACAACCGGAGCGGTTTCTGTTCCTATCTATCA
AGTGTCGACATATAAGCAAGATGGCCTTGGTCAGCCCAAAGCCTATGAATATTCAAGATCTGGGAACCCTACGCGTCATG
CTTTAGAGAAACTTATTGCCGACTTAGAAGGTGGTGTGCAGGGCTTTGCTTTCGGCTCAGGTTTAGCTGGTATTCATGCC
GTTCTTTCTATTTTTAAATCGGGGGACCACTTGATTTTAGGTAATGATGTTTATGGGGGAACTTTCCGCTTAATGGATAA
AGTCATGTCTAATTTTGGTTTAGAATATGATTTGGTGGATTTGACAGACATTGCTGCTTTAAAAGATAAGATTAAAGCCT
CAACCAAGGCCATATATTTTGAAACGCCTTCCAATCCTCTGATGACTGTTTTAGATATCCAAAAACTTGCAGATATTGCT
AAGGAAAATAATCTACTGACAATCGTTGACAATACTTTTGCCACACCTTACTTCCAACGTCCCTTAAGTTTAGGTGCGGA
TATTGTCTTGCATTCCGGCACGAAGTACCTTGGTGGACATTCCGATGTTGTTTCAGGGCTTGTCACAACAGATAAAGAAG
ATTTGGCTGAACGTATCGCCTTCATGCAAAATTCAATTGGTGGTGTTTTAGGTCCTCAAGATAGCTGGTTGGTTCAAAGA
GGAATCAAAACTTTGGCACTTCGTATGGAGGCTCATGCTAAAAATGCTCAAAAAATTGCAGAATATCTTGAAGCATCAGA
GGAAGTGAGCAAAGTCTATTATCCAGGTCTCCCGCAAGATCCAGGATATGAGATTGCTTCCCAACAAATGTCTGGTTTTG
GAGGAATGCTTTCTTTCGAGCTTAAGGATGAACGTAAAGTCAAAGACTTTGTTGAAGCTTTAGAATACTTTACTTTAGCT
GAATCCCTCGGTGGTGTAGAAAGTCTGATTGAAGTACCTGCAGTGATGACGCATGCTTCAATACCGAAAGACATTCGTGA
AGCAGCGGGCATTAAGGATGGACTGATTCGCCTATCTGCAGGTATCGAAGATATCCATGATTTATTGGAAGACTTGAATA
GGGCTTTTGAGAAAATGAACTCTTAA

Protein sequence :
MKLKTKMIHGGISEDATTGAVSVPIYQVSTYKQDGLGQPKAYEYSRSGNPTRHALEKLIADLEGGVQGFAFGSGLAGIHA
VLSIFKSGDHLILGNDVYGGTFRLMDKVMSNFGLEYDLVDLTDIAALKDKIKASTKAIYFETPSNPLMTVLDIQKLADIA
KENNLLTIVDNTFATPYFQRPLSLGADIVLHSGTKYLGGHSDVVSGLVTTDKEDLAERIAFMQNSIGGVLGPQDSWLVQR
GIKTLALRMEAHAKNAQKIAEYLEASEEVSKVYYPGLPQDPGYEIASQQMSGFGGMLSFELKDERKVKDFVEALEYFTLA
ESLGGVESLIEVPAVMTHASIPKDIREAAGIKDGLIRLSAGIEDIHDLLEDLNRAFEKMNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-100 54
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-101 54
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-74 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LCGT_0984 YP_004779161.1 cystathionine gamma-synthase BAC0207 Protein 6e-71 43