Gene Information

Name : fliI (BbiDN127_0288)
Accession : YP_004777537.1
Strain : Borrelia bissettii DN127
Genome accession: NC_015921
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 296014 - 297324 bp
Length : 1311 bp
Strand : -
Note : -

DNA sequence :
GTGAGCAATTTTTTTGAAAATTATTTAAGACAAGTAGATGACATTGAAACTGTTTCTTTTGTTGGCAGGGTACAAAAAAT
AAAAGGTCTTTTAGTTGAAAGTTTGGGACCTCAGTGTGCTATTGGAGATTTGTGTTTAATTGATCAAAGAAATGATAAAA
AGGTATGTGCTGAGGTTTTAGGATTTAATGGTCCTTATGTTAGCCTTATGGCTTATGAAGGATTTAGCGGGATTGAGGTT
GGAAATAAAGTCTATTCTTTAAACAAAGGGTTAGAAATAAATCTTAGTGATGAGCTTTTAGGAAGAGTTATTGATTCTCT
TGGCAGACCCATTGATAATAAAGGGTCATTTTTGAACAATAGCTATAAAGAGTTAATTTTTGAAAAAATTAATCCAATTA
ATAGAAGTATTTTTGAAGAGCAAATATTAACAGGGGTTAAAGTTCTTGACGGGTTTTTGCCAGTCGCAAAAGGGCAAAGA
GTTGGTATTTTCTCTGGTTCTGGAGTTGGTAAATCTACTTTGCTTGGCATGATTGCAAAAAATTCAAATGCAGATGTAAA
CGTTATTGCTTTTATTGGGGAAAGGGGTCGAGAGCTTAATGAATTTATTGAATATGAACTTGGTGAAGAGCGTTTAAAAA
AAAGCGTTTTAGTTGTTTCAACTTCTGATGAATCGCCCATATCAAGGTATAAGGGAGCTTATGTTGCTACTATGATAGCA
GAATACTTTAGGGAGCAAGGCAAAGATGTGGTTTTGCTTTTTGATTCTATTACTAGGTTTGCAAATGCTAAAAGAGAGAT
GTCTCTTTCTTTAGGAGAGCCTCCAGTAGCTAAAGGTTATCCACCTTCTGTTTTTGTTGAAATTCCAATTTTGCTTGAGA
GATCGGGTTTTAATGGTAATGGAGGAAGTGTTACTGGGTTTTATACTGTTCTTGTTGAGGGAGATGACTTTACAGAACCT
GTAGCTGATAATATTAAGGCTGTTTTGGATGGTCACATTATTTTAGACAGAGATTTGTTTGACAGAGGAATTTATCCTTC
AATAAATGTTTTAAGTTCAACTTCAAGATCTATTCATAGAATAATGAGTTCAGAAAAACAAAAATTAATTTTGAAAGCTA
GAAATTTATTGTCTATTTATAAAGATTATGAAGATCTTATTAGAACAGGAATTTATCTTAAAGGATCTAATAAGGATGTT
GATTTTGCAATTTCAAAGTATCCTAAGATTATTGATTTTATTTCTCAAGGAATAAATGAAACATTTGATTTTGAAAATTT
AGAAGATGAAATAAAGGAAATATTATCTTGA

Protein sequence :
MSNFFENYLRQVDDIETVSFVGRVQKIKGLLVESLGPQCAIGDLCLIDQRNDKKVCAEVLGFNGPYVSLMAYEGFSGIEV
GNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGSFLNNSYKELIFEKINPINRSIFEEQILTGVKVLDGFLPVAKGQR
VGIFSGSGVGKSTLLGMIAKNSNADVNVIAFIGERGRELNEFIEYELGEERLKKSVLVVSTSDESPISRYKGAYVATMIA
EYFREQGKDVVLLFDSITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERSGFNGNGGSVTGFYTVLVEGDDFTEP
VADNIKAVLDGHIILDRDLFDRGIYPSINVLSSTSRSIHRIMSSEKQKLILKARNLLSIYKDYEDLIRTGIYLKGSNKDV
DFAISKYPKIIDFISQGINETFDFENLEDEIKEILS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 4e-78 43
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 3e-82 43
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 9e-82 43
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 9e-82 43
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-82 43
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-82 43
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 4e-83 43
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-83 43
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-85 42
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 4e-85 42
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 4e-85 42
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-85 42
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-85 42
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 2e-84 42
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 7e-76 42
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-84 41
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-71 41
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-71 41
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 1e-66 41
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 9e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_004777537.1 flagellar protein export ATPase FliI VFG2144 Protein 3e-95 46
fliI YP_004777537.1 flagellar protein export ATPase FliI VFG0390 Protein 1e-82 44
fliI YP_004777537.1 flagellar protein export ATPase FliI VFG0048 Protein 3e-82 43
fliI YP_004777537.1 flagellar protein export ATPase FliI VFG0515 Protein 2e-82 43
fliI YP_004777537.1 flagellar protein export ATPase FliI VFG2499 Protein 3e-78 43
fliI YP_004777537.1 flagellar protein export ATPase FliI VFG1254 Protein 7e-84 42
fliI YP_004777537.1 flagellar protein export ATPase FliI VFG0192 Protein 9e-83 41