|
Name : Cycma_0986 (Cycma_0986) Accession : YP_004772989.1 Strain : Cyclobacterium marinum DSM 745 Genome accession: NC_015914 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 1158858 - 1160237 bp Length : 1380 bp Strand : + Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit; COGs: COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase su DNA sequence : ATGAACCATTTAACACCAAAGCAAATTGTTGCTGAACTGGATAAATATATAATTGGGCAGAATGAGGCAAAAAGAAATGT CGCGATTGCTTTAAGGAACAGAATTCGCCGGCTTATGGTGAAATCTGACCTTCAAAAGGACATCGTTCCCAATAACATCT TGATGATAGGCTCTACGGGAGTTGGTAAAACTGAAATCGCTAGAAGATTGGCGAAAATTGCCAATGCACCTTTCACAAAA GTAGAGGCATCCAAGTTTACTGAAGTAGGCTATGTTGGAAGAGATGTAGAATCTATGGTAAGAGATTTGGTGGAACATGC CGTAAATCTGGTTAAAGAAGCAAAAAATGAAGAAGTAAAGGAAAAAGCAGCAGTGATTGTTGAAGACATGCTTCTGGATA TTTTGATTCCTCCGGTAAGAGGAACAGGTTTTAGCACTACACAAAAAGAGAATTTTAACCCTGACAATGCCAGTGAGCAA GAGCTCAATGAAAAAACCAGAGAGCGATTCAAAGAGAAATTGAAGCATGGAGAACTGGAAGAAAGGAAAATCGAAATCAA TGTAAAGCAGTCTTCTCCTGCAGGAATTGGTATGGTGGGAAATGGCATGATGGACGAAGCCAGTATGGCAGGCATTCAAG ACATGCTTAGCAATATGATGCCGAAGCGTACCAAAAAAAGAAAAGTCACTATTTCGGAAGCTCGAAAAATTTTAATGGAG GAAGAAGCTTCCAAGCTTATTGATTTTGATGAAGTAAAAGAAGAAGCCATCAAGCTTGCAGAGAACAATGGGATCATATT TATTGATGAAATAGACAAAATTGCTTCAAGCTCAAGTAAATCAGGTGGACCGGATGTCAGTAGAGAAGGTGTACAAAGAG ATTTGCTTCCGATTGTAGAAGGTAGTGCTGTCAATACCAAGTATGGTTTGGTACATACAGACCATGTACTGTTTATAGCA GCAGGAGCATTTCACGTCAGCAAACCTTCGGATCTGATCCCCGAATTACAGGGAAGATTTCCAATTCGTGTAGAACTTAC CAGTTTGACTCAAGAGGACTTCTATAAAATACTTAAGGATCCAAAAAATGCCCTTACCAAGCAATATCAGGCTTTATTTG AAGCAGAGGAAGTTTATTTAGAATATACTGACGATGCCATCCAAGAGATTGCCTCACTGGCATTTAGTATCAATGAAGAA GTAGAAAATATCGGTGCAAGAAGGTTACATACAGTTATGAGTCATTTATTAAACGACTTTTTGTTTGAGGTTCCGGATTC AATTGGTCCCAATAGCAAAATCATGATTACAAAAGATCTTGTCAATGAAAGGTTAAGCTCTTTGGTGAAAAACAGAGACC TTTCCCAATTCATCCTTTAA Protein sequence : MNHLTPKQIVAELDKYIIGQNEAKRNVAIALRNRIRRLMVKSDLQKDIVPNNILMIGSTGVGKTEIARRLAKIANAPFTK VEASKFTEVGYVGRDVESMVRDLVEHAVNLVKEAKNEEVKEKAAVIVEDMLLDILIPPVRGTGFSTTQKENFNPDNASEQ ELNEKTRERFKEKLKHGELEERKIEINVKQSSPAGIGMVGNGMMDEASMAGIQDMLSNMMPKRTKKRKVTISEARKILME EEASKLIDFDEVKEEAIKLAENNGIIFIDEIDKIASSSSKSGGPDVSREGVQRDLLPIVEGSAVNTKYGLVHTDHVLFIA AGAFHVSKPSDLIPELQGRFPIRVELTSLTQEDFYKILKDPKNALTKQYQALFEAEEVYLEYTDDAIQEIASLAFSINEE VENIGARRLHTVMSHLLNDFLFEVPDSIGPNSKIMITKDLVNERLSSLVKNRDLSQFIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 8e-96 | 50 |
