Gene Information

Name : Cycma_0964 (Cycma_0964)
Accession : YP_004772967.1
Strain : Cyclobacterium marinum DSM 745
Genome accession: NC_015914
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism pyridoxal-phosphate-dependent protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 1134314 - 1135459 bp
Length : 1146 bp
Strand : +
Note : PFAM: Cys/Met metabolism PLP-dependent enzyme; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: mtt:Ftrac_3758 cystathionine gamma-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; SPTR: C

DNA sequence : 
ATGAAATTTGCTACAAAAGCCATTCACGCAGGGATAAAACCGGACATCGGTACAGGGGCAATTATGACCCCTATTTTCCA
AACTTCTACCTATGTTCAAAAATCTCCCGGAGATCACAAAGGTTTTGAATATTCGAGGACCCAGAACCCTACGAGGCAAG
CCTTGGAACAAAATTTGGCTGCCTTGGAAAATGGGCAACATGGCTTATGCTTTTCCTCCGGCATGGCCGCTATAGATTGT
ATACTTAAACTTTTGAAACCTGGTGACGAGGTCATTAGTACCAATGATTTATATGGTGGGACTTATAGAATCTTCACCAA
GGTGTTTTCCAAATATGGGATAAAATTTCATTTTGTCAATATGGAAAAACCGGAGGAAATACTCACCTATATCAATGAAA
ACACCAAAATGATATGGGCCGAAACACCTACGAATCCGATGATGAATATTATTGATATTCAAGCCTTGGCAGGCATTGCC
AAAAGCAATCATTTATTATTAGGGGTGGACAATACCTTTGCAACACCCTTTTTGCAAAGCCCGCTGGATCTAGGTGCTGA
CCTTGTCATGCATTCTGTTACAAAATACCTTGCCGGACATTCAGACGTGGTCATGGGGGCCATTGTGGTAAAGGACAAAA
AACTTGCAGAGGATTTGGCCTTTATTCAAAATTCTTGTGGAGCAGTTCCGGGTCCTCAAGATTGCTTTTTAGTTTTGAGA
GGAATTAAAACGCTGCACCTTAGGATGGAAAGACATTGTCAAAACGGAAAGACCATTGCAGCCTATCTGAAAAATCACCC
TAAAGTTGAAAAGGTTTTTTGGCCGGGATTTGAAGATCACCCAAATCATGGCATAGCCAAAGCCCAAATGAATGATTTTG
GAGGGATGCTATCTTTCACCTTGAAAGGTAACAATATTGAGGACGCCATAAAGGTTTTGGAAAATTTTAGAATTTTTGTA
TTGGCAGAATCTTTGGGAGGTGTTGAATCACTATGTGGACACCCTGCTACAATGACCCACGCTAGTATTCCAAAATCTGA
AAGGGAAAAAGTAGGTTTATCTGATTCTTTGATCAGGTTAAGTGTAGGAATAGAAGATGCTGAAGATTTAAAAAATGACC
TTGCTCAAGCAATGGATAAACTTTAA

Protein sequence : 
MKFATKAIHAGIKPDIGTGAIMTPIFQTSTYVQKSPGDHKGFEYSRTQNPTRQALEQNLAALENGQHGLCFSSGMAAIDC
ILKLLKPGDEVISTNDLYGGTYRIFTKVFSKYGIKFHFVNMEKPEEILTYINENTKMIWAETPTNPMMNIIDIQALAGIA
KSNHLLLGVDNTFATPFLQSPLDLGADLVMHSVTKYLAGHSDVVMGAIVVKDKKLAEDLAFIQNSCGAVPGPQDCFLVLR
GIKTLHLRMERHCQNGKTIAAYLKNHPKVEKVFWPGFEDHPNHGIAKAQMNDFGGMLSFTLKGNNIEDAIKVLENFRIFV
LAESLGGVESLCGHPATMTHASIPKSEREKVGLSDSLIRLSVGIEDAEDLKNDLAQAMDKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-90 53
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-89 52
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-60 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cycma_0964 YP_004772967.1 Cys/Met metabolism pyridoxal-phosphate-dependent protein BAC0207 Protein 4e-71 43