Gene Information

Name : Cycma_0533 (Cycma_0533)
Accession : YP_004772539.1
Strain : Cyclobacterium marinum DSM 745
Genome accession: NC_015914
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 611444 - 612874 bp
Length : 1431 bp
Strand : -
Note : PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; COGs: COG0469 Pyruvate kinase; InterPro IPR015793:IPR015794:IPR001697; KEGG: mtt:Ftrac_1175 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase

DNA sequence : 
ATGAGAGTACCTATTTTTAATAAAACCAAAATATTAGCTACTATTGGTCCTGCCAGTAATAATAAGGAAACCATTACGGA
GCTTGTGATGGCCGGGGCTGATATTTTCAGGTTAAACTTCTCCCATGGCGATCATAGCATTCATGCGGCAGTCATTAAAA
CCATCCGTGAAATGAATGACAGCCTGAACCTTAGTACAGGGATATTGCAGGATCTCCAGGGACCAAAAATTAGAGTGGGT
GAGGTGGAAAATAATGAGGTGCTGATTAAGCCCGGAGATCCCATTACCATTACAAACGACCCTGTGGTGGGGACAGCCAG
TTTGGTGAGCACAGTTTACCAAAATTTGCCCAATGATGTGGTCAAAGGTGACCGTATCCTTATCGATGATGGAAATTTGG
AATTGGTAGTGCTTAAAACAGATGGAAAAAATGTGGATTGTACCGTAGTACATGGTGGCATTTTGAAATCCAGAAAGGGT
ATCAACCTTCCCAATACAAAAATTAGCGCACCATCTCTTACAGAAAAAGACTTGGTTGACCTTGAGTTTGGCTTGGAAAA
TGAAGTAGATTGGATTGCCCTTTCTTTTGTAAGAAGTGCCGATGATATTCTGGACCTTAGGGAAAGAATTAAAAAAGCCG
GTAAATCTTGTAAAATTGTTGCCAAAATAGAAAAGCCTGAAGCACTGGAGAACATTGATGAAATCATCAATGCTACAGAT
GCAATTATGGTGGCTAGGGGAGACCTTGGCGTAGAAGTGCCTATGGAAATTGTTCCACTATGGCAGAAAAAAATGGTAGA
GAAATGTAAGCTCGCCTGTAAGCCTGTAATTATTGCTACCCAAATGATGGAAAGCATGATCGTAAACCCAAGGCCGACAA
GAGCAGAAACCAATGATGTAGCATCAGCTGTTTTGGATGGGGCTGATGCAGTGATGCTTTCTGCAGAAACAGCTTCAGGA
AAATTTCCTATTGCAGCGGTAAAGGCAATGAGCAGTATTATCGATCATATTGAGGTCAATGGAGAAGTGTACCACAACCT
CTACAAAATCCCTGAAGATACTGAAAGCTTCCTAAGCAATAATTTATTGCTAATGGCTAGTAGGTTGTCTAGAAATGTAA
AAGCCAAGGCAATTGTCGGAATTACAACCTCCGGATTTACAGCATTGCGTATTTCGTCACACCGTCCTTCAGCCGATATC
TTTATCTTTACTCGGAACAAGAAATTGTTAACGCAATTAAGTTTGGTCTGGGGGGTAAGGGCTTTTTATTACGATAGCCA
AGTGTCCACAGATGGTACTTTCCATGATATTCAAGAAAGATTAAAATCTGAAAAACATGTGTCAGCAGGCGATATTGTTA
TCAATACTGCCAGCATGCCACTAAAAGCAAAAGGTAAAACCAATATGTTGAAGATTCATGTGGTGGATTAA

Protein sequence : 
MRVPIFNKTKILATIGPASNNKETITELVMAGADIFRLNFSHGDHSIHAAVIKTIREMNDSLNLSTGILQDLQGPKIRVG
EVENNEVLIKPGDPITITNDPVVGTASLVSTVYQNLPNDVVKGDRILIDDGNLELVVLKTDGKNVDCTVVHGGILKSRKG
INLPNTKISAPSLTEKDLVDLEFGLENEVDWIALSFVRSADDILDLRERIKKAGKSCKIVAKIEKPEALENIDEIINATD
AIMVARGDLGVEVPMEIVPLWQKKMVEKCKLACKPVIIATQMMESMIVNPRPTRAETNDVASAVLDGADAVMLSAETASG
KFPIAAVKAMSSIIDHIEVNGEVYHNLYKIPEDTESFLSNNLLLMASRLSRNVKAKAIVGITTSGFTALRISSHRPSADI
FIFTRNKKLLTQLSLVWGVRAFYYDSQVSTDGTFHDIQERLKSEKHVSAGDIVINTASMPLKAKGKTNMLKIHVVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 7e-69 47
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 7e-69 47
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 7e-69 47
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-68 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cycma_0533 YP_004772539.1 pyruvate kinase VFG0479 Protein 3e-69 47