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Name : Cycma_5073 (Cycma_5073) Accession : YP_004776988.1 Strain : Cyclobacterium marinum DSM 745 Genome accession: NC_015914 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : - Position : 6182889 - 6184202 bp Length : 1314 bp Strand : - Note : PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase; COGs: COG2115 Xylose isomerase; HAMAP: Xylose isomerase; InterPro IPR013452:IPR012307:IPR001998; KEGG: cpi:Cpin_1929 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylo DNA sequence : ATGTCAGATATGTTTTTTCCTGAGATTGATAAGATTAAGTTTGAAGGAAAGGATTCAAAAAATCCCTTGGCTTTCAAATA TTACGATGAGAGCCGGGTAATTGCCGGGAAGACAATGAAAGAGCATTTTCGTTTTGCAATAGCCTATTGGCATTCATTCT GTGCCACCGGAAATGATCCTTTTGGCCCGGGTACAATGGTTCATAAATGGGACCAATCCAATGATCCAATTCAAAGAGCT AAAGACAAAATGGATGCAGCCTTTGAATTTATCGGTAAAATTGGAGCTCCTTTTTATTGCTTTCATGACATTGACCTGAT CGATGAAGGAGACAGCATTGCAACCTATGAAAAACATATGGGGGCAATCGTAGATTATGCCAAGCAAAAGCAAAAAGAGA CCGGAATAAAACTACTTTGGGGAACGGCTAACGTATTTAGTCATCCACGGTATATGAACGGAGCAGCTACCAACCCTGAC TTTGATGTGGTAAGTAGAGCTGCAACCCAGGTGAAAAATGCCATTGATGCAACGATTGAACTTGGAGGTGAAAATTATGT TTTTTGGGGCGGTAGAGAAGGTTATATGTCATTGTTGAATACTGATATGAAACGTGAAACTGAGCACTTGGCCCAGTTTT TAACGATGGCCAGAGATTATGGAAGAAAGCAGGGTTTTGAAGGTACCTTTCTTATTGAACCAAAGCCGATGGAGCCAACC AAACATCAGTACGATTATGATGCAGCTACTGTTATTGGATTTCTTAGACATTTTGGGTTAGACAAAGACTTTAAGCTAAA TTTGGAAGTGAACCATGCCACCCTTGCAGGACATACCTTCCAACATGAATTGCAAGTTGCCACGGATGCAGGTCTTTTGG GAAGTATTGATGCCAATAGAGGAGACTACCAAAATGGTTGGGATACTGACCAATTTGCCATCAATCTACAAGAATTGACA GAAGCCATGCTGGTACTTTTGCAAGGCCCCGGATTTACCACAGGTGGAGTGAATTTTGATGCAAAAATTAGAAGAAACTC TACAGATTTGGACGATCTATTTCATGCTCATGTAGGAAGTATGGATGCCTTTGCAAGGAGTTTGGTTATTGCCAATGATA TCATGGTGCATTCAGATTACCAAACCTTAAGAAAGAACCGTTATGCTTCCTTTGATGGAGGAAAAGGAAAAGACTTTGAA AGTGGAAAACTAGATTTGGAAGCATTAAGAAGCCATGCAATGGAAATTGGTGAGCCGAAAATGACAAGTGGTAAGCAAGA AATGTATGAAAATATCCTGAATCAATTTATTTAA Protein sequence : MSDMFFPEIDKIKFEGKDSKNPLAFKYYDESRVIAGKTMKEHFRFAIAYWHSFCATGNDPFGPGTMVHKWDQSNDPIQRA KDKMDAAFEFIGKIGAPFYCFHDIDLIDEGDSIATYEKHMGAIVDYAKQKQKETGIKLLWGTANVFSHPRYMNGAATNPD FDVVSRAATQVKNAIDATIELGGENYVFWGGREGYMSLLNTDMKRETEHLAQFLTMARDYGRKQGFEGTFLIEPKPMEPT KHQYDYDAATVIGFLRHFGLDKDFKLNLEVNHATLAGHTFQHELQVATDAGLLGSIDANRGDYQNGWDTDQFAINLQELT EAMLVLLQGPGFTTGGVNFDAKIRRNSTDLDDLFHAHVGSMDAFARSLVIANDIMVHSDYQTLRKNRYASFDGGKGKDFE SGKLDLEALRSHAMEIGEPKMTSGKQEMYENILNQFI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 3e-105 | 51 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 2e-105 | 51 |
