|
Name : Cycma_0493 (Cycma_0493) Accession : YP_004772501.1 Strain : Cyclobacterium marinum DSM 745 Genome accession: NC_015914 Putative virulence/resistance : Unknown Product : S-adenosylmethionine--tRNA ribosyltransferase-isomerase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0809 EC number : - Position : 568643 - 569692 bp Length : 1050 bp Strand : - Note : PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); HAMAP: S-adenosylmethionine:tRNA ribosyltransferase-isomerase DNA sequence : ATGAAGTTATCAGATTTCAAGTTTGAAATTCCAAAAAAACTTATTGCCCTTCATCCACCGGAAAACCGAGATGAATCCAG ATTAATGGTTATTCACAAGGATACCGGAAAGATAGAACATAAAGTTTTCAAAGATGTCATCGATTATTTTGATACAGGAG ATGTATTTGTAACCAACAATACAAAGGTATTTCCTGCAAGACTGTATGGAAACAAAGAAAAAACCGGGGCCAAGATAGAG GTTTTTTTATTAAGAGAACTCAATCAGGAGCTTAGGTTGTGGGATGTTTTAGTGGACCCTGCCAGAAAGATTAGGGTGGG AAACAAGCTTTATTTTGGTGATAGTGATTTGGTTGCTGAAGTAATTGACAACACTACTTCCAGAGGCCGAACCATTCGGT TTTTATTTGACGGTACAGATGAGGAGTTTTACAAGACCATAGATACTCTTGGTGAAACGCCTATATTGAAAGATTTCATC GAAAGAGATGTGGTAGATGCTGACAGAGAGCGGTATCAAACCATCTTTGCTCAACATGTAGGCGCTGTTGCCGCCCCAAC GGCAGGCTTGCATTTTACTCCACATTTGATGAAGCGACTGGAAATTAAAGGTGTAGAAGTTAGTCCTATTACTTTGCATA TTGGGCTAGGGACTTTCAGGCAAGTGGATGTAGAAGACCTTACGAAGCATAAAATGGATTCGGAGAATTATGACATTCCA CAAGGAACTGTTGATTTGGTCAATACCGCCCTTGATGAAAAGAAAAGAGTGGTATCTGTGGGAACAACCTCTCTTAAAAC GATTGAATCTTCCGTTACTGCCAATGGTAGATTAAAAGCAAGTAGTGGGTGGACAGATAAGTTTATCATTCCTCCTTACG AATTTAAAATTGCCAATGCCCTAATCACCAACTTTCATTTGCCTGAATCAACATTGTTGATGACAGCTTCTGCCTTTGGT GGGTATGATTTGATCATGAAGGCTTACCAAGAAGGAATCAAAGAAGGTTATAAATTCTTTAGTTATGGTGATGCCATGCT AATCATTTAG Protein sequence : MKLSDFKFEIPKKLIALHPPENRDESRLMVIHKDTGKIEHKVFKDVIDYFDTGDVFVTNNTKVFPARLYGNKEKTGAKIE VFLLRELNQELRLWDVLVDPARKIRVGNKLYFGDSDLVAEVIDNTTSRGRTIRFLFDGTDEEFYKTIDTLGETPILKDFI ERDVVDADRERYQTIFAQHVGAVAAPTAGLHFTPHLMKRLEIKGVEVSPITLHIGLGTFRQVDVEDLTKHKMDSENYDIP QGTVDLVNTALDEKKRVVSVGTTSLKTIESSVTANGRLKASSGWTDKFIIPPYEFKIANALITNFHLPESTLLMTASAFG GYDLIMKAYQEGIKEGYKFFSYGDAMLII |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| queA | AAF71483.1 | QueA | Not tested | Hrp PAI | Protein | 3e-61 | 44 |
| queA | AAF71490.1 | QueA | Not tested | Hrp PAI | Protein | 5e-58 | 43 |
| queA | AAT96106.1 | QueA | Not tested | T-PAI | Protein | 3e-58 | 43 |
| queA | AAT96122.1 | QueA | Not tested | T-PAI | Protein | 7e-60 | 43 |
| queA | AAT96070.1 | QueA | Not tested | T-PAI | Protein | 1e-57 | 43 |
| queA | AAT96042.1 | QueA | Not tested | T-PAI | Protein | 1e-57 | 43 |
| queA | AAT96182.1 | QueA | Not tested | T-PAI | Protein | 7e-58 | 43 |
