Gene Information

Name : Cycma_4552 (Cycma_4552)
Accession : YP_004776471.1
Strain : Cyclobacterium marinum DSM 745
Genome accession: NC_015914
Putative virulence/resistance : Virulence
Product : pyruvate ferredoxin/flavodoxin oxidoreductase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0674
EC number : -
Position : 5515600 - 5519178 bp
Length : 3579 bp
Strand : -
Note : PFAM: domain; Domain of unknown function; 4Fe-4S binding domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; COGs: COG0

DNA sequence :
ATGCCCCTAAAGGATCAATCAAAAAAAGTAACCATTGACGGCAATGAAGCCGTTGCATACGTCGCTTACCGAGTTAATGA
AGTATGTGGGATCTATCCCATCACACCTGCCTCCGCTATGGCCGAGCATGCCGATGAATGGTCCGTAAAAGGAGTGAAAA
ACATTTGGGGCAATATCCCGGACGTCATAGAAATGCAAAGTGAAGGTGGCGCTGCAGGTGTTATTCATGGTGCGCTTCAA
ACCGGGGCGTTGGCCACGACATTTACCGCCTCCCAGGGGTTGATGCTTATGTTGCCCAATATGTATAAGATCGCGGGGGA
ACTCACGGCAACAGTCTTTCATGTGGCGGCACGGTCGCTTGCTGCACAGGCACTGTCTATTTTTGGCGACCACAGCGACG
TGATGGCAGCCAGGACCACAGGTTTTGCCATGATCGCTTCGGCATCTGTGCAGGAAGCCCATGACATGGCCCTTATCTGC
CAGGCGGCAACATTGAAATCAAGGGTACCCTTTATTCATTTTTTCGATGGGTTCCGTACTTCTCATGAAGTGAACAAGAT
CAGCCTTTTAACAGACGGGCAAATCAGGGCTATGATAGATGATGATCTGGTTTACGCCCATCGCCAGCGCAGTTTAAACC
CCGATAATCCCTTTATCAGGGGAACAGCCCAAAATCCCGATGTGTACTTTCAGGCTAGGGAAACTGTTAATCCTTACTAT
TCGGATATTCCGGGAATTTTTCAAAAAGAGATGGATGATTTTGGCAAGCTCACCGGCCGGCATTATACCCTATATGAATA
CTACGGTGATATGGATGCCGAAAGGATGATCGTAATCATGGCTTCCGGTGCTGAAGTGGTCCGCGAAACAGTCAAAACTA
TGACCCTGTCCGGGGAAAAAGTAGGAGTGCTGCAAGTAAGGCTTTTCCGTCCTTTTTCCCTAAAACATTTTCTGGAGGCC
CTCCCACCTTCGGTAAAAAAAATAGCGGTACTGGACCGGACAAAGGAACCTGGTGCTGCCGGGGAACCCCTTTACCAGGA
TGTAGTTACGGTTTTGGCGGAAGCTTACCGCTTGGGGCAGATTACTTCTTTTCCGAATATTGTAGGTGGGAGGTACGGGC
TTTCTTCGAAAGAATTTACCCCGGCTATGGCCAAAGGCGTCTTTGATGAATTGACAAAGCCTCTTCCCAAAAATGGTTTT
ACGATAGGCATCAAGGACGATGTCTTTTATACCAGTATAGAATATGATCCTGCTTTCGATATTATTCCCAAAGGTACCAT
AAGCGCACTCTTCTTTGGGCTGGGATCCGACGGGACAGTGGGGGTCAATAAAAATAGTATTAAGATCATCGGGGAGGGAA
CCGATCTACATACCCAGGGCTATTTTGTGTACGATTCCAAAAAATCCGGGACCCAGACGGTTTCCCATTTGCGCTTTGGC
AAGGAGCCTGTCAACGCCCCTTACCTTATTCGGGAAGCCAGTTTTATTGCCAGCCATAAATTCAACTATATCGAAAAAGT
CCAAATGCTCCGTTTTGCGGCGCAGGGAGCCACTTTTTTATTAAATAGCCCCTATAGTGTTGACGAAGTGTGGGACCGCC
TTCCTCGCCCTGTTCAGGAACAGATCGTAGAAAAGGGACTAAAATTTTATGTGATTGACGGATCGGCTGTGGCAAAGGCT
GCCGGACTGGGAGAGAAAATAAATACTGTTATGCAGGCTTGCTTTTTTGCACTTTCGGGCGTACTGCCAAAGGAGGAAGC
AATAGACAGGATTAAAGAATCAATAAAAAAGACCTACTCCAAAAAAGGAAAAGCCGTAGTCGAGCAGAATTTTCGTGTGG
TAGATGCGGCCCTGGATAATTTGTTTGAGGTAAAGGTGCCAACGAAAGCCTCGGGCCATCTTCCGCTCCCTCCGACCGTA
CCGCCCGAAGCACCTGAATTTGTGCAGCAGGTTACCGCCATGATGATGCGTGGTGACGGCGATGAACTTACTGTTGGCCA
ACTGCCTGTTGATGGCACCTATCCGAGTGCGACCACCCGTTGGGAAAAGCGCAATCTATCCGATATGGTGGCCCAATGGG
ATAAAGATTTATGTATTCAATGTGGCAATTGTAGTTTTGTATGCCCGCATAGCGTTATACGATCTAAATTCTATAACGAG
GCCTATCTGGAACCGGCCCATGAGGAATTTCCTTCCGCGCCTATCAATGCACGCGGATTTCCCGAGACACGCTATACCCT
GCAAGTATATGTGGAAGATTGTACCGGCTGCAACCTCTGTGTGGAAGTCTGCCCGGTTACCGACCCTGATGATGAAAACA
TCAAGGCCATCAACCTGAGGCCCAGGGTACCTGTTCTGGAAAAGGAAAGAGAAAATATTAGTTTCTTTGAAAGCCTTCCC
GTAAACAACCGGGCAGAAATGGATTTCTCCTCGGTACGGGGTGCGCAATTCCTTGAGCCTTTATTCGAGTTTTCGGGAGC
ATGTGCCGGCTGTGGCGAAACACCCTATATCAAAGTGCTTACCCAGTTGTTTGGGGAGCAGCTCATTGTGGCCAATGCTA
CCGGGTGCTCCTCTATTTATGGAGGCAACCAGCCTACAACGCCCTGGGCTGTAAATAAAGAAGGCCGGGGGCCGGCCTGG
TCGAACTCGTTGTTCGAGGACAATGCCGAATTTGGCCTGGGCATGCGGATTGCGGCCGATAACCATCTGGCCATGGCGAG
GGGGTTGTTGCAGCATTTAAGCCCTGAGATAGGCGAAGAATTGACAAGCAGCCTGCTTGACAATGATCAGCTTTACGAAT
CGGAAATAAGCAGGCAAAGGGAAGCGGTAGCCAAACTGAAGAAAAAATTGGCCCAAATGGATCGGGACGAAGCTGAAAAG
CTGCTGTCGGTGGCAGGCCACCTCGTCAGGCGAAGTGTGTGGGCGGTGGGCGGTGACGGCTGGGCCTATGACATAGGCTC
GGGGGGGCTGGATCATGTACTTTCCACAGGTAGGAATGTAAACATACTTGTTCTGGATACCGAAGTATATTCCAATACGG
GAGGGCAAATGTCTAAAGCTACCCCGACCGCAGCTACAGCGAAATTTGCGGCAGGAGGGAAAAAAGTTGGCAAAAAGGAC
CTTGCTCTTCAGGCTATTTCCTATGGCAATGTTTATGTGGCGCAGGTGGCCATGGGTGCCAACGCACAACAAACTCTGCT
CGCCATGCGAGAGGCAGAGGCTTATCCCGGTCCATCGATAATATTGGCTTATAGTCAATGTATAGCCCATGGAATAGATA
TGCGAAAAGGGATGACCCAACAAAAACTGGCTGTAGATTGTGGGCATTGGCCCCTGATCCGCTACAACCCAACTTTGAGG
GAGGCGGGCAAAAACCCGTTTGTGCTTGACTCCCCAAGGCCCACTATAAAATTAAAGGACTATGCTTACAATGAACTGCG
CTATAGCATTTTGGCACGTACCAACCCTCAAGAGGCGGAACGCCTGCTTGACGGGGCACAGGAACTGATTAATTTACGCT
GGAAAACCTACGAAGATATGTCGGGATGGGGGGCAAATAAATTTTGCCCGGTGGTTTGA

Protein sequence :
MPLKDQSKKVTIDGNEAVAYVAYRVNEVCGIYPITPASAMAEHADEWSVKGVKNIWGNIPDVIEMQSEGGAAGVIHGALQ
TGALATTFTASQGLMLMLPNMYKIAGELTATVFHVAARSLAAQALSIFGDHSDVMAARTTGFAMIASASVQEAHDMALIC
QAATLKSRVPFIHFFDGFRTSHEVNKISLLTDGQIRAMIDDDLVYAHRQRSLNPDNPFIRGTAQNPDVYFQARETVNPYY
SDIPGIFQKEMDDFGKLTGRHYTLYEYYGDMDAERMIVIMASGAEVVRETVKTMTLSGEKVGVLQVRLFRPFSLKHFLEA
LPPSVKKIAVLDRTKEPGAAGEPLYQDVVTVLAEAYRLGQITSFPNIVGGRYGLSSKEFTPAMAKGVFDELTKPLPKNGF
TIGIKDDVFYTSIEYDPAFDIIPKGTISALFFGLGSDGTVGVNKNSIKIIGEGTDLHTQGYFVYDSKKSGTQTVSHLRFG
KEPVNAPYLIREASFIASHKFNYIEKVQMLRFAAQGATFLLNSPYSVDEVWDRLPRPVQEQIVEKGLKFYVIDGSAVAKA
AGLGEKINTVMQACFFALSGVLPKEEAIDRIKESIKKTYSKKGKAVVEQNFRVVDAALDNLFEVKVPTKASGHLPLPPTV
PPEAPEFVQQVTAMMMRGDGDELTVGQLPVDGTYPSATTRWEKRNLSDMVAQWDKDLCIQCGNCSFVCPHSVIRSKFYNE
AYLEPAHEEFPSAPINARGFPETRYTLQVYVEDCTGCNLCVEVCPVTDPDDENIKAINLRPRVPVLEKERENISFFESLP
VNNRAEMDFSSVRGAQFLEPLFEFSGACAGCGETPYIKVLTQLFGEQLIVANATGCSSIYGGNQPTTPWAVNKEGRGPAW
SNSLFEDNAEFGLGMRIAADNHLAMARGLLQHLSPEIGEELTSSLLDNDQLYESEISRQREAVAKLKKKLAQMDRDEAEK
LLSVAGHLVRRSVWAVGGDGWAYDIGSGGLDHVLSTGRNVNILVLDTEVYSNTGGQMSKATPTAATAKFAAGGKKVGKKD
LALQAISYGNVYVAQVAMGANAQQTLLAMREAEAYPGPSIILAYSQCIAHGIDMRKGMTQQKLAVDCGHWPLIRYNPTLR
EAGKNPFVLDSPRPTIKLKDYAYNELRYSILARTNPQEAERLLDGAQELINLRWKTYEDMSGWGANKFCPVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AFJ97267.1 pyruvate ferredoxin Virulence Not named Protein 0.0 47