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Name : Cycma_4529 (Cycma_4529) Accession : YP_004776452.1 Strain : Cyclobacterium marinum DSM 745 Genome accession: NC_015914 Putative virulence/resistance : Unknown Product : FAD-dependent pyridine nucleotide-disulfide oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : - Position : 5490132 - 5491478 bp Length : 1347 bp Strand : + Note : PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR004099; KEGG: m DNA sequence : ATGAAGAAGTTTGATGTATTTGTATTAGGGTCGGGAATGGCAGGCATGAACATTGCCAACATTTGTGCCGGAAAAGGACT GAAAGTTGGTATCACGGATGAACTGCCTTATGGAGGAACTTGTGCTCTCCGAGGTTGTGACCCAAAAAAAATAATGCTTG GTGCTACTGAAGCTAAGGATTTTGCACAACGCCTTCACGAAAAACAAATTGCTGAAGTGCCCGCTAAACATTGGGAAGCA GCGATGAAATCTAAACAGGAGTTTGTAGATGCAATGCCCCCTAAAATTGAAAAAGGCTATAAACACAATGGAATTGAAAC CTTTCACAAATCGGCTAAATTTATTTCAGAAAATCAACTGCAAGTAGGTGATGAAACAATAGAGGCAGAAAAAATCGTGA TAGCTACAGGCGCAAAGCCAAAGGTATTGGGAATCCCGGGCGAGGAGCACACGCTGACCAGTACCGACTTTCTGGATTTT GATAAACTTCCCAAATCGATAGTTTTTATAGGTGGTGGCTATATCGCCTTTGAATTTGCGCATATGGCGGCCCGCTTTGG TAGCGAAGTCATCATCCTGCATCGTAGTGAACGTCCTTTAGAAAACTTTGATCCATTTATTGTGGAGCAATTGACGGAGG CCACCAAAAAATTAAACATTAGGGTGGTGTTGAATACCAATGTAACAGCCGTTGAAAAATCGGGAAATTCTTATTTGGTA ACAGGCAAGAATGAAAACGGAGAACAAAACTGGGAGGCGGAAGCAGTGATCAATTCAGCCGGACGACCACCGGCAATTTT TGATCTGGATCTGGAAAAAGCAAATATCGCTTTCAGTAGAAAAGGGATTGAAGTAAATGAGTATTTGCAAAGCAATACCA ATCCTAAGATATACGCTGCCGGTGATGCTGCCAATACCGAGGGAATTCCTCTTACCCCTGTAGCTGTCATGGAAGGTCAT ATAGTTGCTTCTAACATAATAAAGGGTAACACCAAAAAGCCAAATTATACAGGTATTCCCACTGTGGTATTTACCTTACC CACGATGGCATCTGTGGGGTTGTCTGAGGAAAGAGCAACGGAACAAGGCATCAACTTTACGGTGAAGAAAAAAGCAGTTC CGGATTGGTTTACAGGCAAAAGAATTAATGAGAAAACCTATGCGTATAAAACCTTAATAGAAAAGGAAACCGGAAAAATC CTGGGGGCACATATCATTGGACCGCACTCTGAAGAGGTGATTAATCTTTTTGCCATAGCCATAAAAACAGGATTAACTTC CAGAGATATTAAAACGATGATATTTACTTATCCGTCAGCAAGTTCTGATATCGTTTATATGGTTTAG Protein sequence : MKKFDVFVLGSGMAGMNIANICAGKGLKVGITDELPYGGTCALRGCDPKKIMLGATEAKDFAQRLHEKQIAEVPAKHWEA AMKSKQEFVDAMPPKIEKGYKHNGIETFHKSAKFISENQLQVGDETIEAEKIVIATGAKPKVLGIPGEEHTLTSTDFLDF DKLPKSIVFIGGGYIAFEFAHMAARFGSEVIILHRSERPLENFDPFIVEQLTEATKKLNIRVVLNTNVTAVEKSGNSYLV TGKNENGEQNWEAEAVINSAGRPPAIFDLDLEKANIAFSRKGIEVNEYLQSNTNPKIYAAGDAANTEGIPLTPVAVMEGH IVASNIIKGNTKKPNYTGIPTVVFTLPTMASVGLSEERATEQGINFTVKKKAVPDWFTGKRINEKTYAYKTLIEKETGKI LGAHIIGPHSEEVINLFAIAIKTGLTSRDIKTMIFTYPSASSDIVYMV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| merR | BAB47647.1 | regulatory protein | Not tested | Type-III SCCmec | Protein | 3e-104 | 49 |
| SE0080 | NP_763635.1 | regulatory protein | Not tested | SCCpbp4 | Protein | 3e-104 | 49 |
