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Name : Cycma_4506 (Cycma_4506) Accession : YP_004776433.1 Strain : Cyclobacterium marinum DSM 745 Genome accession: NC_015914 Putative virulence/resistance : Resistance Product : heavy metal translocating P-type ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 5470926 - 5473439 bp Length : 2514 bp Strand : - Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2217 Cation transport ATPase; InterProIPR006404:IPR006416:IPR001757:IPR00825 DNA sequence : ATGAAAAAGCTACAAATAAAAATACCATTACTCCTGCCTGAAGTACCGGACGAGAAGGATCAATGTGTGCAAAAACTTAT TCAACAACTTCAGGATAAAGAAGGCCTTGAAAAAGTGCATGTAGCAGACGAAACCGACAATGGCGTACCACAGCTATGCT TTCACTATAACCCTGAGCTTATTACGATTGATCAGATACAAAAATTAGCTAAACGTACAGGTGCTTCCATTATTGATAAA TACGGTCACCGGTTAATTGAGGTAGAAGGGATTCGTCATACCCGTCATGCCAGAAAAATTGAAGAAGCACTCAATAGATT AGATGGAGTTTTACAGTCCGCAGTATCTGCTTCGGGTATGATCGGATTAGAATTTGAAACAGCAAAAATAAACGATGAAA AAATCCTTACTGTATTGCGCAAAGAAGGTTTAGATATTCTATCTACAGAAGTAGAAGTCGAGCGGTACATAAAAAAGACA CATGAAGCCGAAAAAGGCGAAGAGCAAAAAGAAGAAGCTGATAAGGAACATGAACATGAGGAAGGTGAAGATCATGAACA TTCGCATGGAGGCATTTTCGGTAAAAACACCGAGCTGATTTTTTCTATCATCTGCGGAGCATTGCTCGGAATTGGCTTTG GATTGTCTTATGTAGAGGCTGTGCCTTCCTGGGTGAGCCTCGCATTATACATCGGGGCATACTTCTTTGGTGGCTATTTC ACAGCCAAAGAAGCCATTCAAACAGTGGCCAAAGGCGGCTTTGAAATTGATTTCCTGATGCTGGTAGCGGCCATTGGAGC GGCAATTCTGGGCGAATGGGCGGAAGGTGCATTACTCCTCTTCCTTTTTAGCATGGGGCATGCGCTGGAACACTATGCCA TGAACAAAGCCCGTAAATCCATTGCTGCTTTAGCAGATCTCGCTCCTAAAACGGCATTAGTTAAGCGAAATGGTAAAACG GAAGAAGTAGGTATAGAAGAACTAAGCATAGGCGACATCATTGTGGTGAAGCCCAATAGCAAAATCTCAGCCGATGGCGT GATTGTCAGTGGTACAAGTAGTGTGAATCAGGCACCAATCACCGGGGAAAGTGTGCCGGTAGATAAAGAACCGGTGGATA ATCCCGATAAAGACTGGTCACAGGAAAAAGACATCAAAGACGAGAACCGTGCTTTTTCGGGTACCATCAATGGCAACAAT ACGCTGGAAATCAAAGTCATTAAAGTAGCGAAGGACTCTACCCTCTCCCGTTTGGTAAAATTGGTGAATGAAGCCCAGAC TCAGAAATCACCTACCCAACTTCTTACTGATAAGTTTGAGAAATACTTCGTGCCTTCTGTACTGGCACTGGTTGTACTAT TGCTAGGTGCTTTTTTGGTCATTGACGAAACCTTTAGTGAGAGTTTTTACCGCGCGATGGCCGTACTGGTTGCTGCAAGT CCATGTGCGTTGGCGATCTCCACGCCTAGCGCTGTTTTGAGTGGGGTTGCCCGCGCTGCAAAAGGTGGTGTGCTTATAAA AGGTGGACGGCCGTTGGAAGATCTGGGCGTTTTGACAGCTCTGGCCTTCGACAAAACCGGAACGCTAACCGAGGGAAAAC CTAAACTCACCAAAGTAGTTCCTCTTGGGAACGTGAGTGAAAATGAACTCTTAAAAATAGCGGTGGCGGTGGAAAACCTA AGTGACCACCCGCTGGCAAAAGCGGTAGTGAGGGATGGGAAAGAGCGGTTAAAAGATACAGTCATTCCAGAAGCGAGTGA TCTTGAAGCCGTGTTGGGGAAAGGGATCAAAGCTTCATTGGGAAGTGATAAAATCTACATAGGAAACCTTGACTTGTTTG AGGATCTGGATGAAAATAAACCTTCTCAGGAAATAGAAGAACAAGTAAGGGAACTCGAAGGAGGTGGCAACACCACCATG CTTATCCGCAGGAACGCAGAATACATCGGTACGATAGCACTAATGGACACACCGCGTGAATCGGCAAAGGCAACTCTGGC CGAACTGAAAAAAATTGGCATCAAGCGCATGATCATGCTTACCGGGGATAACCAGCAAGTAGCCGATGCTGTAGCCAAAG AAATCGGGCTTACAGATGCCTGGGGAAGCTTGTTGCCCGAAGAAAAAGTGGATGCTATCAAAAAATTGAAAGAACAAGAA TCTAAAGTAGCGATGGTTGGTGATGGCGTGAATGATGCCCCAGCCATGGCCAACAGCACGGTAGGTATTGCTATGGGAGC TGCCGGAAGTGATGTAGCTCTGGAGACAGCCGATATCGCCTTGATGGCGGACAAGCTGGAAACTTTGCCTTTTGCAATTG GGTTGAGTAGAAAGGCAAAAGGCATTATCAAGCAAAATCTCTGGATTAGTTTAGGAATAGTGGCTTTGCTAATTCCTTCA ACTATTTTTGGTTTGGCTAATATTGGTATTGCAGTGCTTATTCATGAAGGTTCTACCTTGGTGGTAGTCTTTAATGCATT GAGATTATTGGCATATAAAAAACACCTATCTTGA Protein sequence : MKKLQIKIPLLLPEVPDEKDQCVQKLIQQLQDKEGLEKVHVADETDNGVPQLCFHYNPELITIDQIQKLAKRTGASIIDK YGHRLIEVEGIRHTRHARKIEEALNRLDGVLQSAVSASGMIGLEFETAKINDEKILTVLRKEGLDILSTEVEVERYIKKT HEAEKGEEQKEEADKEHEHEEGEDHEHSHGGIFGKNTELIFSIICGALLGIGFGLSYVEAVPSWVSLALYIGAYFFGGYF TAKEAIQTVAKGGFEIDFLMLVAAIGAAILGEWAEGALLLFLFSMGHALEHYAMNKARKSIAALADLAPKTALVKRNGKT EEVGIEELSIGDIIVVKPNSKISADGVIVSGTSSVNQAPITGESVPVDKEPVDNPDKDWSQEKDIKDENRAFSGTINGNN TLEIKVIKVAKDSTLSRLVKLVNEAQTQKSPTQLLTDKFEKYFVPSVLALVVLLLGAFLVIDETFSESFYRAMAVLVAAS PCALAISTPSAVLSGVARAAKGGVLIKGGRPLEDLGVLTALAFDKTGTLTEGKPKLTKVVPLGNVSENELLKIAVAVENL SDHPLAKAVVRDGKERLKDTVIPEASDLEAVLGKGIKASLGSDKIYIGNLDLFEDLDENKPSQEIEEQVRELEGGGNTTM LIRRNAEYIGTIALMDTPRESAKATLAELKKIGIKRMIMLTGDNQQVADAVAKEIGLTDAWGSLLPEEKVDAIKKLKEQE SKVAMVGDGVNDAPAMANSTVGIAMGAAGSDVALETADIALMADKLETLPFAIGLSRKAKGIIKQNLWISLGIVALLIPS TIFGLANIGIAVLIHEGSTLVVVFNALRLLAYKKHLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 4e-111 | 42 |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 6e-115 | 42 |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 7e-115 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cycma_4506 | YP_004776433.1 | heavy metal translocating P-type ATPase | BAC0124 | Protein | 0.0 | 55 |
