Gene Information

Name : Cycma_4504 (Cycma_4504)
Accession : YP_004776431.1
Strain : Cyclobacterium marinum DSM 745
Genome accession: NC_015914
Putative virulence/resistance : Resistance
Product : cation efflux protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1230
EC number : -
Position : 5469671 - 5470501 bp
Length : 831 bp
Strand : -
Note : PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: mtt:Ftrac_2056 cation efflux protein; PFAM: Cation efflux protein; SPTR: Cation efflux protein

DNA sequence :
ATGGAATCTGCGAAAAATGTAATGGAAACTACCGGAATGAAAAAAAGCACATTTAGTATAACCAAAATGGACTGCCCCTC
GGAGGAGCAAATGATCCGCATGAAACTGGAACCTCTGGGCCAGATAAAGCACCTGGAGTTTGACATCCCAGCACGCAAGC
TGGACGTCTTCCATCAGGATGAAGTACTGCCTATACAAAATGCCATCAGTGAACTAAACCTCAATGATCAACTCCAAGGT
ACTACTTCTGAGGCAGAAATGCCCATTGCCGAAGACGAGACCAAACACAAGAAAATACTCTGGTGGGTGCTGGGAATCAA
TTTTGGATTTTTCGTCATCGAAATGACTACGGGTTGGATTTCTGCATCTATGGGTCTCATTGCCGATTCGCTGGACATGC
TGGCTGATTCTATTGTTTATGGTCTGAGTCTCTTTGCCGTGGGAGCGGCTGTTTCCCGTAAGAAGAAAGTAGCAAAGATC
AGTGGTTATTTTCAAATGGGCCTGGCGCTCCTTGGCTTTTCAGAAGTACTACGCAGGTTTTTCACCCAAAGCGAAACACC
CCTTTTCCAGTGGATGATTATCGTTTCCCTGCTGGCTTTAGTGGGTAACCTCGTCTCATTATGGCTGATCAACAAGGCAA
AAAGCAAAGAGGCCCACATGCAGGCCAGTGCTATTTTCACTTCTAATGACATCATCGTCAACGGAGGGGTAATACTGGCT
GGTGTCTTGGTTTATTTTCTGGAAAGTAAGTGGCCCGATTTGATTGTTGGCGGGATCGTTTTTGCCTTTGTATTGCGTGG
AGCAGTGAGGATTTTGAAACTGGCTAAATAA

Protein sequence :
MESAKNVMETTGMKKSTFSITKMDCPSEEQMIRMKLEPLGQIKHLEFDIPARKLDVFHQDEVLPIQNAISELNLNDQLQG
TTSEAEMPIAEDETKHKKILWWVLGINFGFFVIEMTTGWISASMGLIADSLDMLADSIVYGLSLFAVGAAVSRKKKVAKI
SGYFQMGLALLGFSEVLRRFFTQSETPLFQWMIIVSLLALVGNLVSLWLINKAKSKEAHMQASAIFTSNDIIVNGGVILA
GVLVYFLESKWPDLIVGGIVFAFVLRGAVRILKLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ACICU_00235 YP_001844894.1 heavy metal detoxification protein Not tested AbaR20 Protein 2e-44 43
cadA ACN81030.1 Co/Zn/Cd efflux system component Not tested AbaR5 Protein 2e-44 43
cadA ACS32042.1 Co/Zn/Cd efflux system component Not tested AbaR5 Protein 2e-44 43
1_43 CAJ77022.1 Heavy metal detoxification protein Not tested AbaR1 Protein 1e-44 43
1_376 CAJ77095.1 Heavy metal detoxification protein Not tested AbaR1 Protein 1e-44 43
cadA ADZ05770.1 Co/Zn/Cd efflux system component Not tested AbaR11 Protein 1e-44 43
cadA AGK36654.1 Co/Zn/Cd efflux system component Not tested AbaR26 Protein 1e-44 43