Gene Information

Name : Cycma_4316 (Cycma_4316)
Accession : YP_004776250.1
Strain : Cyclobacterium marinum DSM 745
Genome accession: NC_015914
Putative virulence/resistance : Resistance
Product : cation efflux protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1230
EC number : -
Position : 5244230 - 5245027 bp
Length : 798 bp
Strand : +
Note : PFAM: Cation efflux family; COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: ran:Riean_1807 cation efflux protein; PFAM: Cation efflux protein; SPTR: Cation efflux protein

DNA sequence :
ATGGAAAAATCTGTATTCAAAATATCACAAATGGATTGCCCTTCTGAGGAACAAATGATTCGGATGAAATTGGATGGAAT
AAACGAAATCAAACAACTTGAATTTGAGATACCTCAAAGGAAACTAACCATATTTCACATTGGCAATACTACGGAAATTG
AAAGGATATTAGCAGAACTAAAATTAGGTTCAAAACTAATATCAAACACACAATCACAGGTAGTAATTGATGTAGAATCA
GACCCAAGCAACCAACGAAAAATCCTTTGGGCTGTTCTTATCATCAATTTTGTCTTTTTTGTTCTTGAAATGCTATTCGG
CTTGATTTCTAAATCTATGGGGTTGGTGGCAGATTCTTTGGATATGCTAGCAGATTCGTTAGTGTATGCATTAAGCTTAC
TGGCAGTAGGTCAAACATTAATTCGTAAAAAGAAAGTAGCTAAACTAAGTGGGTACTTTCAAATGTCATTAGCTCTATTT
GGTTTATTGGAAGTCATTAGACGTTTTGTAGGATCTGATGGCATACCGATTTTTCAAAACATGATTATCATATCCTTTTT
AGCTCTTTTGGCAAATTCCGTTTCACTTTACCTGATTCAAAAGGCGAAGAGCAAAGAAGCACACATGCAAGCTTCTGCAA
TTTTTACTTCCAATGATATTATCATCAATTTAGGTGTAATTTTGGCTGGAGGCTTAGTCTACTATTTTGAAAGTAAAATA
CCTGACTTAGTTATTGGTTCTGTTGTTTTCATTATTGTATTTAGAGGAGCAACAAGGATTTTAAGATTAGCGAAATAA

Protein sequence :
MEKSVFKISQMDCPSEEQMIRMKLDGINEIKQLEFEIPQRKLTIFHIGNTTEIERILAELKLGSKLISNTQSQVVIDVES
DPSNQRKILWAVLIINFVFFVLEMLFGLISKSMGLVADSLDMLADSLVYALSLLAVGQTLIRKKKVAKLSGYFQMSLALF
GLLEVIRRFVGSDGIPIFQNMIIISFLALLANSVSLYLIQKAKSKEAHMQASAIFTSNDIIINLGVILAGGLVYYFESKI
PDLVIGSVVFIIVFRGATRILRLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
1_43 CAJ77022.1 Heavy metal detoxification protein Not tested AbaR1 Protein 7e-47 43
1_376 CAJ77095.1 Heavy metal detoxification protein Not tested AbaR1 Protein 7e-47 43
cadA ADZ05770.1 Co/Zn/Cd efflux system component Not tested AbaR11 Protein 7e-47 43
cadA AGK36654.1 Co/Zn/Cd efflux system component Not tested AbaR26 Protein 7e-47 43
ACICU_00235 YP_001844894.1 heavy metal detoxification protein Not tested AbaR20 Protein 9e-47 43
cadA ACN81030.1 Co/Zn/Cd efflux system component Not tested AbaR5 Protein 9e-47 43
cadA ACS32042.1 Co/Zn/Cd efflux system component Not tested AbaR5 Protein 9e-47 43