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Name : Cycma_4293 (Cycma_4293) Accession : YP_004776227.1 Strain : Cyclobacterium marinum DSM 745 Genome accession: NC_015914 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 5215353 - 5216447 bp Length : 1095 bp Strand : + Note : PFAM: Phage integrase; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: cly:Celly_3208 integrase; PFAM: Integrase, catalytic core, phage; SPTR: Integrase DNA sequence : ATGAAAGTAACACTAAGAAAACGCAATCAAGGTGGCAAGACCAGTCTATACCTCGACTACTACCACAAAGGGAAAAGGAA GACGGAATACCTCAAATTATACCTTTCTCCCAATGCAAAGACCAAAGAGGAAAAGGAAGTTAACAAAAAGACCCTTCAAT TGGCTGAGACTATTAGAGCACAGCGACAAATCGAAATCCAAAACGGTGTATATGGATTCAGAGATAATGAGAAATTGAAA GGCAGCTTCCTTGCATACATTGAGCTACTGGCTAACCAGAGGCAGGATAGCCCTGGCAATTACGGCAATTGGACAAGTAT GCTGAAACATCTAAAGGCTTTCTGTTCCTATGAGGTATCCTTCTCAGATATTGACCGACAGTTTATTCAGGATTTCAAAT ACTACCTTGATAAGAAGGCTATTGCACATGGTGACCAGAAACTATCTCAAAATTCTAAGTACTCCTACTTTAACAAGCTG CGAGCAGCTTTAAAGCAAGCAGTGAAAGACGGTATTCTACCTACCAACCCAAGTGAAGGAGTTGACGCCTTTAAACAAGG TGAACCTGAAAGAGAATTTCTGACTTTGGAGGAACTGCAAGCAGCAGCCAATACGGAATGTGAAATACCTCAGATGAAAA CGGCATTCATATTTTCATGCCTTACTGGTTTGCGGTGGTCAGACATTAATAAGCTACTCTGGTCAGAGGTGCAGCACTCA AATGATAACGGGTATTACATCCGATTCAGACAAAAGAAAACCAAGGGAGCAGAAACCCTCCCTATTTCAGAACAAGCCTT TGGCTTGCTCGGTGAAAGGCAAGCTCCAGAAGAGCGAGTATTCAAAGGATTGAAATACTCTGCATGGCATAACCTGAAAT TGCAACAATGGATGATGAAAGCTGGTATCTCCAAAACCATCACTTTCCATTGTGCCCGTCATACCTATGCCACTTTGCAG CTTACGGCAGGAACTGATATTTACACAGTCTCAAAGCTCTTAGGCCATAAGGAATTGAAGACCACCCAAGTCTATGCCAA AATCATAGATGAAAAGAAACAGGAAGCAGCCAACAAAATCAAACTTGACCTATGA Protein sequence : MKVTLRKRNQGGKTSLYLDYYHKGKRKTEYLKLYLSPNAKTKEEKEVNKKTLQLAETIRAQRQIEIQNGVYGFRDNEKLK GSFLAYIELLANQRQDSPGNYGNWTSMLKHLKAFCSYEVSFSDIDRQFIQDFKYYLDKKAIAHGDQKLSQNSKYSYFNKL RAALKQAVKDGILPTNPSEGVDAFKQGEPEREFLTLEELQAAANTECEIPQMKTAFIFSCLTGLRWSDINKLLWSEVQHS NDNGYYIRFRQKKTKGAETLPISEQAFGLLGERQAPEERVFKGLKYSAWHNLKLQQWMMKAGISKTITFHCARHTYATLQ LTAGTDIYTVSKLLGHKELKTTQVYAKIIDEKKQEAANKIKLDL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | AGK06989.1 | integrase | Not tested | SGI1 | Protein | 4e-66 | 42 |
| int | AAG03003.1 | integrase | Not tested | SGI1 | Protein | 4e-66 | 42 |
| int | AGK07047.1 | integrase | Not tested | SGI1 | Protein | 4e-66 | 42 |
| int | ACX47954.1 | integrase | Not tested | SGI1 | Protein | 4e-66 | 42 |
| int | ACS32045.1 | integrase | Not tested | SGI2 | Protein | 4e-66 | 42 |
| int | AGF34959.1 | integrase | Not tested | SGI1 | Protein | 4e-66 | 42 |
| int | AGF34999.1 | integrase | Not tested | SGI1 | Protein | 4e-66 | 42 |
| int | AGF35038.1 | integrase | Not tested | SGI1 | Protein | 4e-66 | 42 |
| int | AGK06906.1 | integrase | Not tested | SGI1 | Protein | 4e-66 | 42 |
| int | AGK06943.1 | integrase | Not tested | SGI1 | Protein | 4e-66 | 42 |
