Gene Information

Name : Cycma_4215 (Cycma_4215)
Accession : YP_004776150.1
Strain : Cyclobacterium marinum DSM 745
Genome accession: NC_015914
Putative virulence/resistance : Unknown
Product : cobalamin synthesis protein P47K
Function : -
COG functional category : R : General function prediction only
COG ID : COG0523
EC number : -
Position : 5122552 - 5123778 bp
Length : 1227 bp
Strand : +
Note : PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain; COGs: COG0523 GTPase (G3E family); InterPro IPR003495:IPR011629; KEGG: shg:Sph21_2587 cobalamin synthesis protein P47K; PFAM: Cobalamin (vitamin B12) bios

DNA sequence :
ATGACCAACCGATTTAGTCAACTTAAAAAATTACCCGTCACCGTACTTAGTGGCTTTCTTGGTGCAGGAAAGACAACGCT
ACTCAACCATGTTCTTAATAATAGAGAAGGACTAAAAGTAGCTGTCATAGTAAATGACATGAGTGAGGTAAATATTGACG
AAAAGTTAATAAGAAATGCAGGAATGCTTTCCAGAACCGAAGAAAAATTGGTAGAAATGAGTAATGGCTGTATTTGCTGT
ACGCTCAGAGAAGACCTTATGCTGGAGGTAGAAAAGCTCGCCAAGATGAATAAATTTGATTATTTACTAATTGAAAGCAC
AGGTATCTCTGAGCCTATTCCGGTAGCGCAAACATTTACTTTTGCCAGTGGAGAGGAGCTTTTGGATCTTACAAAATACA
GTCACCTAGACACCATGGTAACTATGGTAGACGCTTGTAATTTTTTTAAAGATTTTGGCAGTGCAGAAAACATTTTTCAA
CGAAAAATGACCGACGATCCAGAGGATCAAAGATCTCTGGTCAATCTACTCACCGACCAAGTAGAATTTGCCAATGTATT
GGTGGTAAATAAATTAGACTTGATTGACGAGAGTCAGTTGGGATTATTGAAAAACACCCTGCATAAACTTAATCCCACTG
CTAAAATTATATGTACTTCAAATGGAAAGATAGACCCCAAAGAAATACTCAATACCGGCCTTTTCGATTATGATTCTGCA
GAAGAGGCAGCCGGTTGGCAGGTTGAGCTTGAGCGAGCTAAGGAAGGGGTAACCCATCAACCGGAAACAGAAGAATATGG
AATAGGCTCTTTTGTATTTAGAGATCCCAGGCCATTTCATCCGGATAGGTTTCTTCAATACATCGGTCAGGATTTTCCCA
CCAGTATTATCCGAAGCAAAGGAATATTCTGGATGGCTTCCCGACCTGATAAGGCCATATTATGGAGCCAGGCAGGAGGT
TCGCTTAAAGCAGAGACTTATGGTAGATGGTGGGCAGGACTTTCTACACTAGAAAGAGAAACCAATCCATTGTTTATAGA
GAACAAAGCTTTTATCATGGAAAAATGGGACCAACAATGGGGAGATCGGATGATTGAGCTTGTGTTTATAGGGCAAGACA
TGGATAAGGGACAAATTACATCAGATTTAAGGAATTGTTTGCTAACTGACGATGAAGTAATGGCCTTGAATTCGGGAAAA
CAATATAATGATACCTGGCCAATTTAA

Protein sequence :
MTNRFSQLKKLPVTVLSGFLGAGKTTLLNHVLNNREGLKVAVIVNDMSEVNIDEKLIRNAGMLSRTEEKLVEMSNGCICC
TLREDLMLEVEKLAKMNKFDYLLIESTGISEPIPVAQTFTFASGEELLDLTKYSHLDTMVTMVDACNFFKDFGSAENIFQ
RKMTDDPEDQRSLVNLLTDQVEFANVLVVNKLDLIDESQLGLLKNTLHKLNPTAKIICTSNGKIDPKEILNTGLFDYDSA
EEAAGWQVELERAKEGVTHQPETEEYGIGSFVFRDPRPFHPDRFLQYIGQDFPTSIIRSKGIFWMASRPDKAILWSQAGG
SLKAETYGRWWAGLSTLERETNPLFIENKAFIMEKWDQQWGDRMIELVFIGQDMDKGQITSDLRNCLLTDDEVMALNSGK
QYNDTWPI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0450 YP_039898.1 cobalamin synthesis protein Not tested vSa¥á Protein 7e-87 51
SAS0408 YP_042534.1 cobalamin synthesis protein Not tested vSa¥á Protein 1e-85 50