Gene Information

Name : Cycma_4192 (Cycma_4192)
Accession : YP_004776127.1
Strain : Cyclobacterium marinum DSM 745
Genome accession: NC_015914
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 5092995 - 5093699 bp
Length : 705 bp
Strand : +
Note : PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: mtt:Ftrac_2612 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: AB

DNA sequence : 
ATGGAAAATATCATTTCATTAGAACATGTAACCAAGAAATTTGAAGTTGGTGATGGTTACTTCACCGCTTTAAATGATGT
TTCATTATCATTTAAAACCGGAGAATTCGCAGGCTTTGTAGGACCGAGTGGTTCAGGAAAAACCACACTATTAAATATCA
TTGGCTCCCTGGATAGTCCCACAGACGGAAAGGCAATGGTAATGGGAAAAGACATTGCTATATTAAGTCACAAGGCTTCG
GCCAACCTAAGGAATCTCCACATTGGTTTTATTTTTCAGGTTTTTAACCTTCTTCCAGTATATACGGTCTTTGAAAATGT
AGAATTTGCTCTGCTTTTGCAGGATGTACCAAAAGAAACAAGGAAAAAGGAAGTAATGGAAGCTTTAGATTGGGTTGGCT
TAGAAAAGATGGCTCATAAAAAGCCTGACAAATTATCCGGTGGGGAAGGGCAAAGGGTGGCCATTGCCAGGGCCATGGTG
AAAAAGCCAAAAATATTGCTGGCAGATGAACCCACAGCCAACTTGGACTCAGCCAATGCACATGCCATTTTAAAAACCAT
GAAAAATTTGAACAAAGAATTGGGGACAACCTTCCTGTTTTCAACACATGATGAAAAAGTCATGACTTATCTTGATCGTA
CGGTATCTTTAAAAGATGGAAAAGTTGTTTCAGATGTAATAAATAGCCAAACCTTTCAATCATGA

Protein sequence : 
MENIISLEHVTKKFEVGDGYFTALNDVSLSFKTGEFAGFVGPSGSGKTTLLNIIGSLDSPTDGKAMVMGKDIAILSHKAS
ANLRNLHIGFIFQVFNLLPVYTVFENVEFALLLQDVPKETRKKEVMEALDWVGLEKMAHKKPDKLSGGEGQRVAIARAMV
KKPKILLADEPTANLDSANAHAILKTMKNLNKELGTTFLFSTHDEKVMTYLDRTVSLKDGKVVSDVINSQTFQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cycma_4192 YP_004776127.1 ABC transporter NC_012469.1.7686878. Protein 7e-40 43
Cycma_4192 YP_004776127.1 ABC transporter NC_008702.1.4606598. Protein 6e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cycma_4192 YP_004776127.1 ABC transporter VFG0869 Protein 2e-18 41