Gene Information

Name : Cycma_3926 (Cycma_3926)
Accession : YP_004775866.1
Strain : Cyclobacterium marinum DSM 745
Genome accession: NC_015914
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 4742038 - 4743564 bp
Length : 1527 bp
Strand : +
Note : PFAM: Aldehyde dehydrogenase; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: mtt:Ftrac_0952 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; SPTR: Aldehyde dehydrogenase

DNA sequence : 
ATGTCAACACAAACATTATCCCAAAGTAAACCGGTGAATAGGCCGGAAGTAAAAGAAAAATACGATCATTTTATTGGAGG
AAAGTGGGTGGCGCCTACCAATGGTGAATATTTTGATAATATTTCACCCATAGATGGTAAGCCATTTACCAAAGCAGCAA
GAGGAAATAAGGAGGATGTGGAATTGGCTCTGGATGCTGCCCATGAGGCCTTCAAAACTTGGTCTAAAACTTCTCCGGCT
GAGAGAAGTAAATTGTTAAATAAAATTGCTGATGTAATTGAGGACAACCTTGAAATGCTGGCTCGAATTGAGACGGTAGA
CAATGGGAAAGCATTAAGGGAAACCAGAGGGGCTGATTTGCCTTTGGTAATCGATCATTTCAGGTATTTTGCCGGCGTAA
TTAGAGCTGATGAGAGTACCATTTCTGAACATGATGAAAATACTGTCAGCATAGCATTACATGAGCCCCTAGGGGTGGTA
GCTCAAATCATTCCATGGAATTTCCCTTTGCTAATGGCAACTTGGAAAATTGCGCCTGCCTTGGCAGCAGGTTGTTGTAC
CATAGTGAAACCGGCTGAACAAACGCCCACTAGCATCATGGTATTGATGGAGTTGATCGGAGATATATTACCTCCGGGTG
TGCTAAATGTGATTACTGGGTTTGGTCCTGAAGCCGGAAAGCCATTAGCAAGTTCAAAGAGAGTAGCTAAGGTTTCCTTT
ACCGGAGAAACTACTACTGGTCGATTGATTATGCAGTATGCCTCTGAAAACTTGGTGCCCGTGACCATGGAATTGGGTGG
TAAATCTCCAAATATTTTCATGAAGTCTGTGGCGGATGCCGATGATGATTATTTTGATAAGGCTGTAGAGGGAGCTGTTT
TATTTGCCTTTAACCAAGGTGAGGTCTGTACATGTCCTTCCAGAATTTTAGTTCATGAGGATATTTATGATGTTTTTATG
GAGAAGGTTATCGAAAGGACAAAAGCCATAAAAATGGGACACCCGCTAGCAGAGGACACCATGATGGGTGCCCAATCTTC
CAATGATCAGCTGGAGAAAATCATGTCCTATATGGACATCGGTAAAAAAGAAGGGGCTCAAATTTTGTGTGGTGGAGCTA
AAGCAGGGCTGAACAGTGGATTGGAAGAAGGATACTATGTGCAGCCTACTATCTTTAAGGGACATAACAAAATGAGGGTT
TTCCAAGAGGAGATTTTCGGTCCGGTAACTTCAGTAACCACATTTAAAACTACTGAAGAAGCCATAGAAATAGCCAATGA
TACCATGTATGGTTTGGGAGCAGGTTTATGGTCAAGAGATGCCCATGAATTGTATCAGGTTCCTAGGGCCATAAAAGCTG
GCAGGGTTTGGGTTAATTGTTACCACGCATATCCTGCACATGCTCCTTTTGGCGGGTATAAAAAATCTGGATTTGGCAGG
GAAAACCACTTGATGATGCTGGACCATTACCGACAAACCAAAAACATGTTGATTTCGTATGATAAGAATAAGTTGGGTTT
CTTTTAA

Protein sequence : 
MSTQTLSQSKPVNRPEVKEKYDHFIGGKWVAPTNGEYFDNISPIDGKPFTKAARGNKEDVELALDAAHEAFKTWSKTSPA
ERSKLLNKIADVIEDNLEMLARIETVDNGKALRETRGADLPLVIDHFRYFAGVIRADESTISEHDENTVSIALHEPLGVV
AQIIPWNFPLLMATWKIAPALAAGCCTIVKPAEQTPTSIMVLMELIGDILPPGVLNVITGFGPEAGKPLASSKRVAKVSF
TGETTTGRLIMQYASENLVPVTMELGGKSPNIFMKSVADADDDYFDKAVEGAVLFAFNQGEVCTCPSRILVHEDIYDVFM
EKVIERTKAIKMGHPLAEDTMMGAQSSNDQLEKIMSYMDIGKKEGAQILCGGAKAGLNSGLEEGYYVQPTIFKGHNKMRV
FQEEIFGPVTSVTTFKTTEEAIEIANDTMYGLGAGLWSRDAHELYQVPRAIKAGRVWVNCYHAYPAHAPFGGYKKSGFGR
ENHLMMLDHYRQTKNMLISYDKNKLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-145 59
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-151 59
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-151 59
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-151 59
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-150 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cycma_3926 YP_004775866.1 aldehyde dehydrogenase VFG0082 Protein 8e-146 59