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Name : Cycma_3396 (Cycma_3396) Accession : YP_004775350.1 Strain : Cyclobacterium marinum DSM 745 Genome accession: NC_015914 Putative virulence/resistance : Unknown Product : Tex-like protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 3992441 - 3994705 bp Length : 2265 bp Strand : + Note : PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; General secretion pathway protein K; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; COGs: COG2183 Transcriptional accessory protein; InterPro IPR006641:IPR018974:IPR003 DNA sequence : ATGTCAGATTTGAATCATTATTCCAAGATTGCCACTGAGTTAGGTGTTCGAGAAAAGCAAGTAATCAGTACGGTCAATTT ACTAGATGAGGGTGGAACAGTACCTTTTATTTCCAGGTATAGAAAAGAAGTCACCGGAAGTTTGGATGAGGTGCAAGTTG CAGCTGTAAGAGATAGGTTGCAACAGCTAAGGGACCTGGATAAGCGCAAGGAAGCCATAATAAAATCCATAGATGAACAG GGTAAATTAACAGGTGCATTGGCTGATAAAATCAATGCTGCTGAAACAATGTCTATTTTGGAAGATATTTACCTACCCTA CAAACCCAAAAGAAGAACCAAAGGTACCATCGCCAAAGAGAAGGGTCTTGAACCATTGGCACAATTGATTTTTGAACAAA ATTCAATTGATTTAAACAAGTCCGCTGAAGAATACCTCAGCGAAGAAAAAGGGGTGGCTTCTATAGATGAAGCCTTGAAT GGAGCCAGAGATATCATTGCTGAATGGATCAATGAGGATGCTGAAATTAGGAAAAAATTAAGGCAGCTCTTTATTGAAGA GGGGGAATTTGTATCGAAAGTCATTCCGGGAAAAGAAGAGGAAGCGATCAAATACAAAGATTACTTTGACTGGAGAGAAC CTGTTAAAACAGCACCTTCTCACAGGGTTTTGGCCATGAGAAGAGGAGAAAAAGAACTTTTCCTGATGTTGGACACAGGC CCTGATGACTTAACGGCTACCAAGATTATTGAAAAGGCAGTCGTCAAAGAAAACAACACTTGTGCTGACCAAGTAAGGCT GGCAGTGAAAGATGGCTATAAGAGGTTGCTTAAACCTTCTATGGAAACGGAAGTGAGGCTATATGCCAAGAAAAAAGCCG ATGAAGATGCGATTAAGGTATTTACAGAAAACCTTAGGCAATTGTTGCTAAGTTCACCTTTGGGTGAAAAATCAGTATTG GCCATAGATCCCGGATTTAGGACCGGTTGTAAGGTTGTTTGTCTTGGACCCCAAGGTCAATTCCTTCAGAACGAAACCAT CTTCCCTAATGAACCACAGAAGAAAACCATGGAATCGGGAGCCTTGATCAAACATATGGTAGCAACACATAAAATTGAGG CAATCGCAATTGGCAATGGAACGGCAAGCAGAGAGACGGAAAATTTTGTAAAAAACATTGGCCTACCAAAAGATGTTTTG GTGGTCATGGTCAATGAAAGCGGAGCTTCTATTTATTCTGCATCTGATGTGGCTAGGGAAGAATTTCCGGATTTTGACCT AACTGTAAGAGGGGCGATTTCAATTGGCCGCAGGTTAATGGACCCATTGGCAGAATTGGTTAAAATTGATGCCAAATCCA TTGGCGTTGGGCAATACCAGCATGATGTAGATCAGACTGCACTAAAAAATTCCCTAGATGATACGGTAATGAGCTGTGTA AATGGTGTAGGGGTAGAAGTAAATACAGCTTCTAAGCAATTATTGACCTATGTTTCCGGTCTTGGGCCTTCTTTGGCACA GAACATCGTGGCCTATCGAAATGAAAATGGCCCTTTTAAAAGTAGAGCAGATATTAAAAAGGTGCCACGTTTAGGTGAAA AAGCATTTGAACAAGCTGCAGGATTCCTGAGAATTCGAAATGGCAAAAACCCTCTTGATAGTAGTGCAGTCCACCCCGAG CGATATGCCTTGATCAATAAAATGGCAAAGGATATGGGAGTCTCTGTTGAGGAGTTGTTGAAAAAAGAGGAATTGCTTCA GAAGATTCCACTTAAAGATTATGTCAATGAACAGGTAGGTTTGCCTACCCTTAAGGATATTCTTGAAGAGTTGGGAAAAC CGGGTAGGGACCCACGAGAAAAATTTGAGGTTTTTCAATTTGAGGATGGAATCAATGAAATGAAAGACTTAAAGGTAGGG ATGAAATTGCCGGGTATCGTTACAAATATCACCCAGTTTGGTGCTTTTGTAGATATCGGTGTACACCAAGATGGTCTGGT TCACTTAAGCCAAATGGCAGACAGGTTTATCAAAGATCCTAAAGAAGTGGTGGCTGTCAACCAAAAGGTCATGGCCACTG TAATGGAAGTGGACTTGCCGAGAAAAAGAATTGGCTTAAGTCTTAAGTCTGATCCTTTTGCCAGTAACACTTCCTCGGGA GGTAGAAGGGAAAGACCAAGAAAAAATCAACAAGGCAACCAAAAAGTAGCTCAAGAAAGCATGGAAGACAAACTTGCCTT GCTAAAAAAGAAGTTTGGGAAATAA Protein sequence : MSDLNHYSKIATELGVREKQVISTVNLLDEGGTVPFISRYRKEVTGSLDEVQVAAVRDRLQQLRDLDKRKEAIIKSIDEQ GKLTGALADKINAAETMSILEDIYLPYKPKRRTKGTIAKEKGLEPLAQLIFEQNSIDLNKSAEEYLSEEKGVASIDEALN GARDIIAEWINEDAEIRKKLRQLFIEEGEFVSKVIPGKEEEAIKYKDYFDWREPVKTAPSHRVLAMRRGEKELFLMLDTG PDDLTATKIIEKAVVKENNTCADQVRLAVKDGYKRLLKPSMETEVRLYAKKKADEDAIKVFTENLRQLLLSSPLGEKSVL AIDPGFRTGCKVVCLGPQGQFLQNETIFPNEPQKKTMESGALIKHMVATHKIEAIAIGNGTASRETENFVKNIGLPKDVL VVMVNESGASIYSASDVAREEFPDFDLTVRGAISIGRRLMDPLAELVKIDAKSIGVGQYQHDVDQTALKNSLDDTVMSCV NGVGVEVNTASKQLLTYVSGLGPSLAQNIVAYRNENGPFKSRADIKKVPRLGEKAFEQAAGFLRIRNGKNPLDSSAVHPE RYALINKMAKDMGVSVEELLKKEELLQKIPLKDYVNEQVGLPTLKDILEELGKPGRDPREKFEVFQFEDGINEMKDLKVG MKLPGIVTNITQFGAFVDIGVHQDGLVHLSQMADRFIKDPKEVVAVNQKVMATVMEVDLPRKRIGLSLKSDPFASNTSSG GRRERPRKNQQGNQKVAQESMEDKLALLKKKFGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 1e-165 | 49 |
