Gene Information

Name : Cycma_3387 (Cycma_3387)
Accession : YP_004775341.1
Strain : Cyclobacterium marinum DSM 745
Genome accession: NC_015914
Putative virulence/resistance : Unknown
Product : class II aldolase/adducin family protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : -
Position : 3979246 - 3979953 bp
Length : 708 bp
Strand : -
Note : PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: fjo:Fjoh_1120 L-ribulose-5-phosphate 4-epimera

DNA sequence :
ATGAGTAAATACGAAGAACTGAGATTTAATTGTTACGCAGCTAATATGGAATTACCAAAGCTGGATTTGGTGGTCTATAC
CTTTGGAAATGTAAGTGCTGTAGACCGAGAAAACGGAGTATTTGCCATCAAACCAAGCGGAGTTCCTTATGAAAAATTAA
AACCAAAAGACATCGTAATTGTAGATTTTGAAAACAATGTCGTGGAAGGGAACATGAGACCCTCTTCGGACACCAAAACC
CATGCTTTCTTGTACAAGCAATGGCAGAACATTGGTGGAATATGCCATACCCACTCCTGTTATGCCGTATCTTGGGCTCA
AGCACAGATGGATATTCCTTTATTTGGAACCACACATGCTGATCATAACACCAGCGATATTCCTTGTGCATCTCCCATGA
GTGATGCAAATATTTCAGGAGACTATGAACACATGACAGGGCAGCAAATATTGGACTGCTTCGAAGAAAAAAATATTTCT
TATGAAGAGGTAGAAATGATTCTTATTGGAAACCACGGCCCCTTTACGTGGGGAAAGGATGCCCAAAAAGCGGTGTACAA
TAGTAAGGTGTTGGAAGAAATTGCACGAATGGCTTATTTGACTTTACAAATCAATCCCAACGCACCGAGGCTTAAAGATG
CCTTAGTAAGGAAGCATTATGAGCGGAAGCATGGGAAAGGAGCCTACTATGGTCAAGCCGGTAAATAA

Protein sequence :
MSKYEELRFNCYAANMELPKLDLVVYTFGNVSAVDRENGVFAIKPSGVPYEKLKPKDIVIVDFENNVVEGNMRPSSDTKT
HAFLYKQWQNIGGICHTHSCYAVSWAQAQMDIPLFGTTHADHNTSDIPCASPMSDANISGDYEHMTGQQILDCFEEKNIS
YEEVEMILIGNHGPFTWGKDAQKAVYNSKVLEEIARMAYLTLQINPNAPRLKDALVRKHYERKHGKGAYYGQAGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 1e-49 52