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Name : Cycma_3370 (Cycma_3370) Accession : YP_004775324.1 Strain : Cyclobacterium marinum DSM 745 Genome accession: NC_015914 Putative virulence/resistance : Resistance Product : rhodanese-like protein Function : - COG functional category : R : General function prediction only COG ID : COG0491 EC number : - Position : 3949805 - 3951187 bp Length : 1383 bp Strand : - Note : PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001763; KEGG: shg:Sph21_3587 beta-lactamase domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Metallo- DNA sequence : ATGTTTTTCGAACGTGTTTATGATAAAAGTTTAGCACAGGCCAGTTATGTTATCGCTTGTCAAGCTGCCGGGGTAGCAGC TGTAATAGACCCTAAAAGGGATGTGGACACTTATTTGAAAATTGCAGAAGAAAATAATTTTACGATTACTAAAATTTTGG AAACCCATATCCATGCGGACTTCTTATCCGGATCTCGGGAGTTAGCTTCCCTTACGGGTGCGGAAATGTACCTTTCCGAT ATGGGGGATAAAGATTGGCAGTATGAATTTCCTCATAAAAAAACCCTCAATGGTGACCATATTGAATTAGGCAACTTGGA TTTCGGAGTAGTTTCAACCCCGGGACACACACCGGAGAGCTTAAGTTTTATACTTACTGACAAAGCAGCAAGCGATGCAC CGGTCATGATTTTTACCGGAGATTTTATATTTGTAGGAGATGTAGGAAGGCCAGACTTGTTGGAACAGGCTGCCGGGATC AAAGGAAGCCAAGAAATTGGTGCAGGTCAATTGTTCGAATCTTTGCAAGATTTCCTAGATTTTCAGGATTTTATCCAGGT TTGGCCCGGGCATGGCGCTGGTTCGGCCTGTGGGAAATCGCTAGGAGCAGTCCCTTCCACCACTGTAGGATATGAGAAAA TTAGAAATTGGGCTTTTAAGTTGTTGGATGATAAAGAAACTTTCACCAAAACTTTATTGGAAGACCAACCTGAGCCACCC AAGTATTTTGCTAAAATGAAACAGCTCAATAAAATTGAGCGAAAACTGCTTACAGAAGTTCCCGAGATAAGGCATTTAAA TAAAAATGAATTTAAGGATATTTTACATGGAGAAATGCCCATCATTGATACCCGAACACCAGAGGCATTTGCCGATGGAT TTTTAAGTAGGAGTTTGAATATTGAAAACAACAATAGCTTTCCTACTTGGATGGGATGGTATATGGATTACGATAAACCA TTTGCATTAATTGCCATGCCGGATGAAATAGAAGATCTTTCCAGAAAATTGATGAGAATTGGATTAGACAACGTTTTTGG ATACATCAGCCCTTCTGAGCTTAAGGAAATCAGTGACTTAGCATTTAATAAAGAAGCACCTATAGGTAAAGAAGCTGTAA AAGAAAAAGTTGTCAACCAAAATGCACAAATTATAGATGTAAGAGGTGCCTCGGAATATAAAAAAGGTCATATCGATGGG TCCATAAACTTATTTGTAGGAAAATTAAATGAGAACCTTGAACAGGTTAGTAAAGACCGCCCTGTGATCGTGCATTGTTT ATCAGGCAGTCGGTCTGCTATTGCTTATTCATTACTTAAAGCCAATGGATTTGAAAATGTTTACAATTATTCCGGTGGAT GGCAAGACTGGCAGCAGCTTTGA Protein sequence : MFFERVYDKSLAQASYVIACQAAGVAAVIDPKRDVDTYLKIAEENNFTITKILETHIHADFLSGSRELASLTGAEMYLSD MGDKDWQYEFPHKKTLNGDHIELGNLDFGVVSTPGHTPESLSFILTDKAASDAPVMIFTGDFIFVGDVGRPDLLEQAAGI KGSQEIGAGQLFESLQDFLDFQDFIQVWPGHGAGSACGKSLGAVPSTTVGYEKIRNWAFKLLDDKETFTKTLLEDQPEPP KYFAKMKQLNKIERKLLTEVPEIRHLNKNEFKDILHGEMPIIDTRTPEAFADGFLSRSLNIENNNSFPTWMGWYMDYDKP FALIAMPDEIEDLSRKLMRIGLDNVFGYISPSELKEISDLAFNKEAPIGKEAVKEKVVNQNAQIIDVRGASEYKKGHIDG SINLFVGKLNENLEQVSKDRPVIVHCLSGSRSAIAYSLLKANGFENVYNYSGGWQDWQQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | BAB83478.1 | - | Not tested | SCC 12263 | Protein | 5e-79 | 42 |
| unnamed | BAA86645.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 1e-77 | 41 |
| SACOL0046 | YP_184956.1 | metallo-beta-lactamase | Not tested | Type-I SCCmec | Protein | 1e-77 | 41 |
