Gene Information

Name : Cycma_3185 (Cycma_3185)
Accession : YP_004775144.1
Strain : Cyclobacterium marinum DSM 745
Genome accession: NC_015914
Putative virulence/resistance : Resistance
Product : transferase hexapeptide repeat containing protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 3732929 - 3733573 bp
Length : 645 bp
Strand : +
Note : COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: ppn:Palpr_0909 transferase hexapeptide repeat containing protein; SPTR: Transferase hexapeptide repeat containing protein

DNA sequence :

ATGAGAACGAACCCATTACCCGGCCCGGATAAAAATGAATCCTTTCCTTTATTGAATCATAACAAATTGTGTTTCTTGAA
GAATATCATCACCAACCCCAATATAGAAGTGGGGGATTTTACCTATTATGATGATTTAGAGGATGTTTACAATTTTGAGA
AAAACGTCAAGTACCATTTTGATTTTATAGGTGACAAATTAATAATAGGTAAATTTTGCATGATCGCCTCAGGTGTTTCT
TTTATTATGAATGGAGGGAATCACCTCAGTACTTCTATTTCAGCCTATCCCTTTGCGATATTTGGACATGGCTGGGAAAA
AGCCATGAAAGGAAAAAGTTACCCCTATAAAGGAGATACTATGGTTGGCAATGACGTTTGGTTAGGTCATGAGGTAACCG
TTATGCCTGGGGTTAAAATCGGTGATGGGGCCATTATTGCTAGCCATTCAGTTGTTACTGCTGATGTTCCACCCTATGCA
GTTGTTGGCGGAAATCCAGCTAAACTAATTCGAAAAAGGTTTTCTGAGGATAATATTAGTCGATTACTCGATTTAAAATG
GTGGAACTGGTCCATTCAAAAAATTACGGACCATGCACATCTATTAACAGGTGATGATATAGAAGAATTCTTAAAACAGG
TTTAA

Protein sequence :

MRTNPLPGPDKNESFPLLNHNKLCFLKNIITNPNIEVGDFTYYDDLEDVYNFEKNVKYHFDFIGDKLIIGKFCMIASGVS
FIMNGGNHLSTSISAYPFAIFGHGWEKAMKGKSYPYKGDTMVGNDVWLGHEVTVMPGVKIGDGAIIASHSVVTADVPPYA
VVGGNPAKLIRKRFSEDNISRLLDLKWWNWSIQKITDHAHLLTGDDIEEFLKQV

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
catB3	AET25385.1	chloramphenicol acetyltransferase	Not tested	PAGI-2(C)	Protein	3e-31	46
catB3	AFG30108.1	chloramphenicol acetyltransferase	Not tested	PAGI-2	Protein	3e-31	46
catB8	YP_005797132.1	chloramphenicol acetyltransferase	Not tested	AbaR4e	Protein	6e-31	45

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Cycma_3185	YP_004775144.1	transferase hexapeptide repeat containing protein	AM180355.1.gene2499.	Protein	5e-45	47
Cycma_3185	YP_004775144.1	transferase hexapeptide repeat containing protein	AY740681.1.gene5.p01	Protein	2e-31	46
Cycma_3185	YP_004775144.1	transferase hexapeptide repeat containing protein	AF322577.2.gene4.p01	Protein	2e-31	46
Cycma_3185	YP_004775144.1	transferase hexapeptide repeat containing protein	AY123251.gene2.p01	Protein	2e-31	45
Cycma_3185	YP_004775144.1	transferase hexapeptide repeat containing protein	CP001581.1.gene990.p	Protein	1e-33	44
Cycma_3185	YP_004775144.1	transferase hexapeptide repeat containing protein	NC_002516.2.878374.p	Protein	3e-32	43