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Name : Cycma_3080 (Cycma_3080) Accession : YP_004775039.1 Strain : Cyclobacterium marinum DSM 745 Genome accession: NC_015914 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 3606673 - 3607971 bp Length : 1299 bp Strand : + Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase, central domain; UDP-glucose/GDP-mannose dehydrogenase, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; COGs: COG0677 UDP-N-acetyl-D-mannos DNA sequence : ATGAGTACTCCTTTAAAAGATGTGAAAATTGCTGTAATCGGCTTGGGCTATGTTGGTCTTCCCTTGGCTGTAGAATTTGC CAAAAAATTCCCTGTAATTGGCTTTGATATTTCCTCCAAGAGAGTAGATGAGCTAAATAGCGGACACGACTTCACTTTAG AAGTGGAAGATAAGGATTTGCAAGCAGTTTTAGCTCAATCAAGCCCGAAGGACAAAGGACTTTTTAACTCAAACAATCCT GATGATCTTGCCGATTGTCAGGTATACATCGTAACTGTACCTACGCCAACGGATCGACACAATCGTCCTGTATTGACTCC TATGCTTAAAGCTTCGGAGACCATTGCCAAATACCTTAAAAAAGGGGATGTTGTTATTTATGAATCTACAGTTTATCCCG GAGTTACGGAAGAAGAATGTGTGCCTTTACTAGAGAAAATAAGCGGGATGACCTTTAATAAAGATTTCTATGCAGGATAT TCCCCTGAAAGAATTAATCCCGGGGATAAGGAACATACTGTTGCTAAAATTCTAAAAGTTACTTCAGGTTCTACTCCGGA AATTGCAGAATATGTTGACAGCCTGTATAGAGAAGTAATCACAGCAGGAACACATAAAGCCAGTAGCATCAAAGTAGCTG AGGCAGCTAAAGTAATTGAAAACTCTCAACGAGATATTAATATTGCTTTTGTCAATGAATTGTCCAAGATTTTTAATCTT TTGGATATTGATACGCAAGAAGTATTGGAAGCAGCCGGAACCAAATGGAATTTTCTTCCTTTTAGACCGGGTTTGGTTGG GGGGCACTGTATCAGTGTAGATCCCTTCTACTTGGCGCAGAAGGCTCAGGAAGTAGGTTACCATCCGGAAATTATATTGG CCGGAAGAAGGTTGAATGATTCCATGGGCAAACATGTGGCTACAGAAGTAATCAAACACATGATGCGTAAAGATTTGAAG GTAATCGATAGTAAAGTATTGATCCTTGGGTTTACCTTCAAGGAAGATTGTCCGGATGTTAGAAATACCAGGGTAATTGA CATTTATAAGGAATTGAGAAATTTTGACATGTCTGTGGAAGTTTATGATCCTTGGGCAAATCCGGAAGAAGTCAAACATG AATATGGTGTGGAGATTATTGGTGGTAAACAATGCCCACCTTTAGAGGAGTATTCCGCCGTAGTTTTGGCTGTAGCACAT AAAGAATTTAAAACACTTGCCTTAGAAAAAAGCAAAGATTTGGTGGTATATGATGTCAAAGCCGTTTTACCCAAAGATAA GGTTGACGCAAGACTTTAA Protein sequence : MSTPLKDVKIAVIGLGYVGLPLAVEFAKKFPVIGFDISSKRVDELNSGHDFTLEVEDKDLQAVLAQSSPKDKGLFNSNNP DDLADCQVYIVTVPTPTDRHNRPVLTPMLKASETIAKYLKKGDVVIYESTVYPGVTEEECVPLLEKISGMTFNKDFYAGY SPERINPGDKEHTVAKILKVTSGSTPEIAEYVDSLYREVITAGTHKASSIKVAEAAKVIENSQRDINIAFVNELSKIFNL LDIDTQEVLEAAGTKWNFLPFRPGLVGGHCISVDPFYLAQKAQEVGYHPEIILAGRRLNDSMGKHVATEVIKHMMRKDLK VIDSKVLILGFTFKEDCPDVRNTRVIDIYKELRNFDMSVEVYDPWANPEEVKHEYGVEIIGGKQCPPLEEYSAVVLAVAH KEFKTLALEKSKDLVVYDVKAVLPKDKVDARL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 1e-119 | 56 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 1e-119 | 56 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-104 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cycma_3080 | YP_004775039.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 6e-120 | 56 |
