Gene Information

Name : Cycma_3049 (Cycma_3049)
Accession : YP_004775008.1
Strain : Cyclobacterium marinum DSM 745
Genome accession: NC_015914
Putative virulence/resistance : Unknown
Product : catalase related subgroup domain-containing protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0753
EC number : -
Position : 3563360 - 3564871 bp
Length : 1512 bp
Strand : +
Note : PFAM: Catalase; Catalase-related immune-responsive; COGs: COG0753 Catalase; InterPro IPR018028:IPR010582; KEGG: Catalase; PFAM: Catalase related subgroup; Catalase-related immune responsive; SPTR: Catalase

DNA sequence :
ATGGCAGAAGAAAACAAGCACAACAAACTTACGACAGCTTCAGGTAGAATCTATGTCGAAAACGAAAATTCAAAAACAGT
TGGTCCCAGGGGACCGATTCTATTAGAAGATTATATACTCCACGAGAAGATGGCTCACTTTAATAGGGAGAGAATTCCGG
AAAGAGTAGTTCATGCCAAAGGTTCGGGTGCATTTGGAACCTTTACTGTAACCAATGATATATCAGCCTATACCAAGGCA
AAAGTTTTCAATAAAATAGGTAAAAAGACCAAAGTATTTCTTAGGTTCTCTACAGTTGGAGGAGAAAAGGGATCTCCGGA
TACGGAAAGAGATCCAAGGGGATTTGCAGTAAAATTTTATACCGAGGATGGCAATTGGGATCTTGTGGGAAACAATACTC
CGGTTTTTTTCATAAAAGACCCTAAAAAGTTTTCAGATTTTATTCATACCCAAAAAAGAGATCCCTATACCAATTGCAAA
TCGCCTACCATGATGTGGGATTATTGGTCTTTGACTCCAGAATCCTTGCATCAAGTTTTAATTTTAATGAGTGATCGTGG
GACTCCCGTAGGTTATAGACATATGAATGGCTATGGTTCACATACTTTTTCAATGATCAATGCAAAGAATGAAAAAACAT
ATGTAAAGTATCACTTTAAAACCGCCCAAGGAATCAAGAACTTAACGGATGAAGAGGCGGCTCAGATGAAAGCCAAAGAT
TTGGATTTCTCACAAAGAGACCTTGTGGAATCCATTGATAAAGGAGACTTCCCAAAATGGAACATGAAGATTCAGGTAAT
GACACCTGAACAAGCTAAAAAGGTTGATTTTAATCCTTTTGACTTGACCAAGGTGTGGCCACATTCGGAATTTCCTTTAA
TCGATGTAGGTGTATTGGAGTTAAATCAAAACCCGGATAATTATTTTCAAGATGTAGAGCAATCAGCTTTTGCTCCTGCC
CATCTGGTAGACGGTCTAGGTTACAGCCCGGATAAGATGCTTCAAGGAAGATTACTATCTTACCCTGACGCCCACAGGTA
CAGATTAGGAGGTAATTATGAACAAATTCCTGTGAATAGATGTCCGTATGCCGTAAACAATTACCAAAGAGATGGTGTGA
TGAGTGTGAATGGCAACGGTGGAAGGAAGCCCAATTACTGGCCAAATAGTTTTGATGAGGTTGAGGTGGACAAAACTTAT
CAGGAACCTTCAGAACAACTTGAGGAAAATATTGCTGATTGGTACGATAGAAATAGTAAATTAGGAGGTAACGATCATTA
TTCCCAGCCTAGGGCTTTGTTTAGAGATGTTATGAGTAAAGAAGAGCAAGACAATACCATAAAAAATACAATAGGGGCAA
TGAGTGGTGTTTCAGGGCCGAAAAGAGATCTAATTATAAACCGACAGCTTTGTCACTGGTTCAGAATGGATGAAGAATTT
GGAGCAAGGGTAGCCAAAGGCTTAGGTGTAGATTTAAATGCTGTAATGAGTGCATCTTCAGGCTCACATTAA

Protein sequence :
MAEENKHNKLTTASGRIYVENENSKTVGPRGPILLEDYILHEKMAHFNRERIPERVVHAKGSGAFGTFTVTNDISAYTKA
KVFNKIGKKTKVFLRFSTVGGEKGSPDTERDPRGFAVKFYTEDGNWDLVGNNTPVFFIKDPKKFSDFIHTQKRDPYTNCK
SPTMMWDYWSLTPESLHQVLILMSDRGTPVGYRHMNGYGSHTFSMINAKNEKTYVKYHFKTAQGIKNLTDEEAAQMKAKD
LDFSQRDLVESIDKGDFPKWNMKIQVMTPEQAKKVDFNPFDLTKVWPHSEFPLIDVGVLELNQNPDNYFQDVEQSAFAPA
HLVDGLGYSPDKMLQGRLLSYPDAHRYRLGGNYEQIPVNRCPYAVNNYQRDGVMSVNGNGGRKPNYWPNSFDEVEVDKTY
QEPSEQLEENIADWYDRNSKLGGNDHYSQPRALFRDVMSKEEQDNTIKNTIGAMSGVSGPKRDLIINRQLCHWFRMDEEF
GARVAKGLGVDLNAVMSASSGSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 2e-120 56
katA YP_005126717.1 catalase Not tested Not named Protein 3e-96 45
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 1e-90 44
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 1e-90 44
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 1e-90 44
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 1e-90 44