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Name : Cycma_2921 (Cycma_2921) Accession : YP_004774887.1 Strain : Cyclobacterium marinum DSM 745 Genome accession: NC_015914 Putative virulence/resistance : Virulence Product : ATPase AAA Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3402366 - 3404891 bp Length : 2526 bp Strand : + Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; UvrB/uvrC motif; ATPase associated with various cellular activities (AAA); COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; Inter DNA sequence : ATGGAAGCAAAATTTTCAAACAGAGTAAAAGAGGTGATCTCTCTTAGCCGCGAAGAAGCTTTGCGCTTGGGTCATGATTA CATCGGTACAGAACACCTCTTGTTAGGAATGATTCGTGAGGGTGAAGGTGTAGCTGTTTCCATTCTAAAGAAGTTAGGTG TACCATTGGACGAGTTGAGAAACGCGGTTGAGCGTGCAGTGAAAGGTACGGCCAATCACAACGTAAAAAATCTTGCCAAT ATTCCCCTGACCAGGCAATCAGAAAAAGTACTGAAAATAACTTATTTGGAAGCTAAGATTTTCAAAAGCCAGTTGATAGG GACAGAACATTTATTGTTGTCAATTTTAAGGGACGAGGACAATATTGCCACGCAGATCCTTCAAAAGTTTGATGCTACCT ATGATACAGTTAAGGAAATGTTAGAATTTCAAACCGACCAAACGCCTAGATCAGGTACTGAGGCAGATGATCCCGATGAA GAAGGTTCTAAATTATTTGGTGCTTCAGGAGGTTCATCCGGAGGATCGAAAGGCGCTGCAGAAAAATCCAGGACACCTGT TTTGGATAATTTCGGAAGGGACCTAACCCGTATGGCCGAGGAGGACAAGCTTGACCCAATCATCGGCAGGGAAAAAGAAA TTGAAAGAGTGGCCCAAATTCTTTCCAGAAGAAAGAAAAACAATCCGATTTTAATTGGGGAACCGGGTGTGGGTAAAACA GCCATTGCTGAAGGTTTGGCACTTCGAATTATCCAGAAAAAAGTTTCCAGAGTTTTGTTCAACAAAAGAGTGGTAACCTT GGATCTGGCATCACTTGTTGCAGGGACTAAATATAGGGGACAGTTTGAGGAGCGAATGAAAGCTGTGATGAATGAGTTGG AAAAGTCTCCAAATGTGATCTTATTTATCGATGAGTTACATACAATCGTTGGCGCCGGTGGGGCCAGTGGATCTCTGGAT GCTTCCAATATGTTCAAGCCTGCACTTGCAAGGGGTGAGATACAATGTATAGGTGCCACTACTTTGGACGAATACAGACA ATATATTGAAAAAGATGGCGCTTTGGCGAGAAGGTTTCAGATGGTGATGGTTGACGCCACCTCTCCTGAAGAAACGGTTC AAATCCTTGAGAATATCAAAGATAAATACGAAGACCATCACAATGTAACCTATACACCCGAAGCTATTCAGGCATGTGTC AATCTTTCTGACAGATACATCTCTGATCGATTCCTTCCTGATAAGGCCATTGATATATTAGATGAAGCCGGAGCTAGGGT GCATATCAACAATATTCATGTTCCTGAAAATATTCTTAAACTCGAGGAAGAGGTTGAAAAAATTAAAATTGAGAAAAACA GGGTTGTAAAAAGCCAAAAATACGAAGAAGCGGCTCAACTTAGAGATAAGGAGAAAAAGCTTTTGGAGCAATTGGAGAAT GCCAAAGCCAAGTGGGAAGAAGAAAGCAAAACCAAGCGTTATGCAGTAGAAGAGGACAATGTCGCTGAGGTAATTGCCAT GATGACAGGTATACCTACCCGAAGAATTGCCCAAAATGAAGGGGCCAAGCTTCTGAATATGGGTGAAGAGTTGAAAGGTA AGGTTGTGGGGCAAGATGATGCCATCAAGAAATTGACCAAAGCCATACAGCGGACAAGAGTAGGTTTGAAAGACCCTAAA AAACCGATAGGTTCCTTTGTATTCCTAGGGCCTACAGGTGTAGGAAAGACGGAATTGGCAAAAATGCTTGCTACTTATCT GTTTGACAAGGAAGACGCTCTTGTGAGAATTGATATGTCGGAATACATGGAAAAATTCAGTGTTTCTCGACTGGTTGGAG CACCTCCGGGCTATGTAGGCTACGAGGAAGGTGGGCAATTGACAGAAAAAGTCAGAAGAAAACCTTATTCTGTAGTCTTA CTGGATGAGATCGAAAAAGCGCATCCCGATGTATTCAATATCTTATTGCAAGTATTGGACGACGGAGTTTTGACAGATGG TCTTGGAAGAAGGGTAGATTTTAGAAATACCATTATCATTATGACTTCCAATATTGGAGTTAGAGACTTAAAGGATTTTG GTGCAGGCATAGGTTTTGCCTCCAAGGCGAAAGAGGAGAATATGGACGAGGTAATGAAGTCCACCATCCAAAATGCGCTC AAAAAGGCATTTAGTCCTGAATTTTTGAATAGGTTAGATGATGTAGTGATATTCAACTCTTTAAATAAAGAACATATCCA TAAAATCATTGATATCAATTTGAAGAAATTGTTTGCCAGAATTACTGACTTGGGCTATACCATTGAACTGTCAGAGAAAG CTAAAGACTTTCTTTCCGAAAAAGGATATGACAAGCAATATGGTGCCAGGCCTTTGAATAGAGCCATCCAGAAATACTTG GAAGATGCGCTTGCTGAAGAAATACTCAAAGGAGAATTATCTGAAGGAGATGTTATTCTAGCAGATTATTCCGGAGAAGG AGATGAGCTCGAAATTAGAGTAAATAATAAAGAGAAAGCTGATTAA Protein sequence : MEAKFSNRVKEVISLSREEALRLGHDYIGTEHLLLGMIREGEGVAVSILKKLGVPLDELRNAVERAVKGTANHNVKNLAN IPLTRQSEKVLKITYLEAKIFKSQLIGTEHLLLSILRDEDNIATQILQKFDATYDTVKEMLEFQTDQTPRSGTEADDPDE EGSKLFGASGGSSGGSKGAAEKSRTPVLDNFGRDLTRMAEEDKLDPIIGREKEIERVAQILSRRKKNNPILIGEPGVGKT AIAEGLALRIIQKKVSRVLFNKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEKSPNVILFIDELHTIVGAGGASGSLD ASNMFKPALARGEIQCIGATTLDEYRQYIEKDGALARRFQMVMVDATSPEETVQILENIKDKYEDHHNVTYTPEAIQACV NLSDRYISDRFLPDKAIDILDEAGARVHINNIHVPENILKLEEEVEKIKIEKNRVVKSQKYEEAAQLRDKEKKLLEQLEN AKAKWEEESKTKRYAVEEDNVAEVIAMMTGIPTRRIAQNEGAKLLNMGEELKGKVVGQDDAIKKLTKAIQRTRVGLKDPK KPIGSFVFLGPTGVGKTELAKMLATYLFDKEDALVRIDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVL LDEIEKAHPDVFNILLQVLDDGVLTDGLGRRVDFRNTIIIMTSNIGVRDLKDFGAGIGFASKAKEENMDEVMKSTIQNAL KKAFSPEFLNRLDDVVIFNSLNKEHIHKIIDINLKKLFARITDLGYTIELSEKAKDFLSEKGYDKQYGARPLNRAIQKYL EDALAEEILKGELSEGDVILADYSGEGDELEIRVNNKEKAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cycma_2921 | YP_004774887.1 | ATPase AAA | VFG0080 | Protein | 3e-147 | 53 |
| Cycma_2921 | YP_004774887.1 | ATPase AAA | VFG0079 | Protein | 0.0 | 51 |
