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Name : Cycma_2630 (Cycma_2630) Accession : YP_004774600.1 Strain : Cyclobacterium marinum DSM 745 Genome accession: NC_015914 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 3059686 - 3061407 bp Length : 1722 bp Strand : - Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; COGs: COG1190 Lysyl-tRNA synthetase (class II); HAMAP: Lysyl-tRNA synthetase; InterPro IPR002313:IP DNA sequence : ATGCAATTACTGAACGAACAGGAGATAGAAAGAAGAAAAGACCGGGAGGCATTACTGAATTTGGGAATAGACCCCTATCC GGCACTCTCCTTTCCGATCAATGCCACGGCCGCAGACATCCATCAAAACTACAACAATCGCAAAAACGATTATAAGGGAA TTACTATTGCCGGTAGACTAATGACCAGAAGAATCATGGGCTCTGCAAGTTTTGCAGAAATTCAAGACAGCACGGGTCGG CTTCAAATTTACGTAAGGAGAGATGACCTTTGCCCTGATGAAGACAAAACCCTTTACAACAAAGTGTTTAAGAAGCTTTT AGGAATAGGGGACTTTATAGGCCTCAAAGGCTTTATTTTCACTACTCAAACCGGTGAAATTTCTTTACATGTTCAGGAGT TCACTTTATTATCTAAATCAGTAAAGCCTCTCCCGGTGGTAAAAAGAGATGATGAAGGCAATGTATTTGATGGATTTACA GATCCTGAGCTTAGGTACAGACAACGGTATGTAGACCTTATTGTTAACCCTGAGGTAAAAGAAACCTTCGTCACAAGGTC CAAAATCATTTCCACCATGAGAAATTATTTTGATGACCATGGCTGGATGGAAGTGGAGACCCCTATTTTGCAACAAGTAC ATGGAGGAGCGGCTGCAAAACCTTTTGAAACACATCACAATGCCTTGGACACCCCTTTATTCCTTAGGATAGCCAATGAG CTTTACCTAAAGCGACTAATTGTAGGTGGTTTTGAAGGGGTCTATGAAATCGGTAAAATGTTCCGTAATGAGGGCATGGA CAGAACCCACAATCCGGAATTTACATCCATGGAAATTTATGTGGCCTATAAGGACTACATCTGGATGATGGAAATGGTGG AAGACTTAATTGCTAAAATTGCAAACCGGGTATTGGGTACGACACAAGCAAAAGTTGGGGATAAGGTAATAGAGTTTGAA GGACCTTATAGAAGATTGTCAATGTTTGAATCTATTCAGGAATATACCGGAATAGATGTCAGTCAAATGGACGAAAAAGA ACTCAGGGCGCTATGTAGTGAAATGGATATTGAGGTCGATGATAGCATGGGCAAAGGCAAGTTGATTGATGAAATCTTTG GAGAGAAGGTGGAAGAACACCTGATCCAACCAACCTATATCACAGACTATCCAATAGAAATGACTCCCCTTGCTAAAAAG CACCGAAGCAAACCGGGACTTGTGGAAAGATTCGAATTATTTGTCAATGGTAAAGAGATTGCAAATGCATATACCGAATT GAACGACCCTATAGACCAAAGAGAGCGATTTGAAGATCAACTCAAGTTGGCGCAAAGAGGAGATGACGAGGCCATGGCCA TGGATGAAGATTTTCTTCGTGCCCTCGAATATGGCATGCCACCAACATCCGGCTTAGGTATTGGAATAGACCGACTTTGC ATGATGCTTACAAACCAAAGCACCATTCAGGAAGTCTTGTTTTTCCCTCAAATGAAACCAGAGAAAAAGATAAAAATAGC ATCTGATGAAGACTTTATTGAATTGGGAATAAACCCAGGTCTTATTCCGGCCATCAGAGAATTAAACATCCATACCATTG AGCAGTTGAAGGGGTTAAACCCTAACAAACTTTTCAACGATGTATGCGGAAAAAAGAAAAAACTAAAACTAGATGTACCC AACCCAAGTAAGGAAGAGGTGTCTAACTGGATTAATGGCTAA Protein sequence : MQLLNEQEIERRKDREALLNLGIDPYPALSFPINATAADIHQNYNNRKNDYKGITIAGRLMTRRIMGSASFAEIQDSTGR LQIYVRRDDLCPDEDKTLYNKVFKKLLGIGDFIGLKGFIFTTQTGEISLHVQEFTLLSKSVKPLPVVKRDDEGNVFDGFT DPELRYRQRYVDLIVNPEVKETFVTRSKIISTMRNYFDDHGWMEVETPILQQVHGGAAAKPFETHHNALDTPLFLRIANE LYLKRLIVGGFEGVYEIGKMFRNEGMDRTHNPEFTSMEIYVAYKDYIWMMEMVEDLIAKIANRVLGTTQAKVGDKVIEFE GPYRRLSMFESIQEYTGIDVSQMDEKELRALCSEMDIEVDDSMGKGKLIDEIFGEKVEEHLIQPTYITDYPIEMTPLAKK HRSKPGLVERFELFVNGKEIANAYTELNDPIDQRERFEDQLKLAQRGDDEAMAMDEDFLRALEYGMPPTSGLGIGIDRLC MMLTNQSTIQEVLFFPQMKPEKKIKIASDEDFIELGINPGLIPAIRELNIHTIEQLKGLNPNKLFNDVCGKKKKLKLDVP NPSKEEVSNWING |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-105 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cycma_2630 | YP_004774600.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 7e-106 | 50 |
