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Name : Cycma_2577 (Cycma_2577) Accession : YP_004774547.1 Strain : Cyclobacterium marinum DSM 745 Genome accession: NC_015914 Putative virulence/resistance : Unknown Product : NusG antitermination factor Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 3018219 - 3018776 bp Length : 558 bp Strand : + Note : PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG; COGs: COG0250 Transcription antiterminator; InterPro IPR006645:IPR005824:IPR001062; KEGG: mtt:Ftrac_3020 transcription antitermination DNA sequence : ATGGCAGATCACAATTGGTACGTACTCAGAGTAGTAGCAGGTCAGGAAAAGAAAGCAAAGACTTATTTGGACAATGAAAT TGCCCGACAGAAGCTTGAAGACTATATTCCTGAAGTTTTGATACCTTCTGAGAAAGTATATGAAATGCGCAATGGCAAAA AGCGTGTCAGGGAAAGAAACTTCTTTCCTGGATATGTGTTGGTCAATGCGGATCTCAGTCATGGAGAAGCCAATCACGTC ATTACGAGTATACCGGGAGTAATCGGTTTTTTAGGGTCAAACCAAGGGGGGGCTTCCAAAACCCCTGAGCCATTACGTCA GTCAGAAATCAACAGGATTTTAGGTCGTGTTGAAGAGATTGATGAGTTTGCAGAAAAACTGGATACACCATTTATAGTTG GAGAGACCGTGAAGGTAATGGACGGTCCCTTTAGTGGATTCTCGGGTATGATTGAAGAGGTATTTGATGACAAGAAGAAG CTTAATGTTATGGTTAAGATATTCGGTCGTAATACCCCTGTTGAATTAAACTTTATTCAAGTAGAAAAACTAGATTAG Protein sequence : MADHNWYVLRVVAGQEKKAKTYLDNEIARQKLEDYIPEVLIPSEKVYEMRNGKKRVRERNFFPGYVLVNADLSHGEANHV ITSIPGVIGFLGSNQGGASKTPEPLRQSEINRILGRVEEIDEFAEKLDTPFIVGETVKVMDGPFSGFSGMIEEVFDDKKK LNVMVKIFGRNTPVELNFIQVEKLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 2e-31 | 43 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 2e-31 | 43 |
