Gene Information

Name : Cycma_2544 (Cycma_2544)
Accession : YP_004774514.1
Strain : Cyclobacterium marinum DSM 745
Genome accession: NC_015914
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 2974097 - 2974816 bp
Length : 720 bp
Strand : +
Note : PFAM: ABC transporter; COGs: COG4181 ABC-type transport system involved in lysophospholipase L1 biosynthesis ATPase component; InterPro IPR003593:IPR003439; KEGG: mtt:Ftrac_2284 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, A

DNA sequence : 
TTGTTTTTGTTCAAAAGGGATAAGTTTTTTTCTTTGAAAGATATGAACATACTAAGCGTTGAAAATCTGAGCAAAACCTA
CCGTAGTGGAAACAGGGAACTCACTGTATTAGATCAGGTAAGTTTTGAAGTGGAACAAGGTAAAACCCTTTCAATAGTCG
GCCCTTCCGGGAGCGGTAAAACCACCCTGTTGGGCTTATGCGCCGGTTTGGATGTGGCCAGTTCCGGAAGCGTTCGCATG
GATGGTAAAGCACTTGAAAACATGAACGAAGATCAAAGGGCCGGCATTAGGAATCAATTGGTGGGTTTTATTTTCCAAAA
TTTTCAACTTTTACAAACTTTAACAGCATTGGAAAATGTAATGGTTCCTTTGGAGTTAAAGAAACGAAAAGATGCCAAAG
ATAAGGCAAAAGAGCTTTTGGTAAAAGTAGGGCTTGGGGACAGGCTAACCCATTACCCTAATCAATTATCCGGTGGGGAA
CAACAAAGGGTTTCCATTGCCAGGGCTTTTGCAAATGAGCCAAAAATATTATTTGCAGACGAACCTACCGGCAACTTAGA
TACTGAAACCGGAGAAATGGTTGAAAATCTAATCTTTAAGCTAAACAAGGAGCAAGGGACCACATTAATTTTGGTTACCC
ACGACTTGGAATTAGCAGCAAAAACACACCAGTCATTACATATTAAAGGCGGTAAAATACAGGAGGCTACACATGGTTGA

Protein sequence : 
MFLFKRDKFFSLKDMNILSVENLSKTYRSGNRELTVLDQVSFEVEQGKTLSIVGPSGSGKTTLLGLCAGLDVASSGSVRM
DGKALENMNEDQRAGIRNQLVGFIFQNFQLLQTLTALENVMVPLELKKRKDAKDKAKELLVKVGLGDRLTHYPNQLSGGE
QQRVSIARAFANEPKILFADEPTGNLDTETGEMVENLIFKLNKEQGTTLILVTHDLELAAKTHQSLHIKGGKIQEATHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cycma_2544 YP_004774514.1 ABC transporter NC_012469.1.7686878. Protein 9e-35 43
Cycma_2544 YP_004774514.1 ABC transporter CP001581.1.gene598.p Protein 5e-30 42