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Name : Cycma_2517 (Cycma_2517) Accession : YP_004774487.1 Strain : Cyclobacterium marinum DSM 745 Genome accession: NC_015914 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2942796 - 2945411 bp Length : 2616 bp Strand : + Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; COGs: COG0542 ATPase with chaperone activity ATP- DNA sequence : ATGGATTTCAAGCAATTTACAATTAAATCACAAGAGGTGATTCAGAAAGCCTTGGAGCTATGTACCGCTGAGCAACAGCA GCTAATAGAGCCTGCTCACTTGCTGAAAGGAATTGTCCAAGTAGATGCCAATGTTACGGATTTTATATTTCAGAAATTAG GGATCAATTCAGGGTTGATCTTACAGAAGTTAGATGAAATCATTAACCAATATCCAAAGGTAAGTGGCCAGCAACCCTAT TTATCCAACGCAACCAATGAGGTGCTAACACAAGCTAAAAAGTACCTGAAGACTTTTGGGGATGAATTTGTAGCAGTAGA GCATTTGTTATTAGGTGTTTTGGCCGGTTCCGAGAAAGTAGCCCAGCTATTAAAAGGACAAGGCTTGAATGAAAAGAAAT TAATAGAAGTAATAAAGGAACTTAGAAAAGGAAATAAAGTGACAGATCAAAATGCAGAATCTAAATACAGGTCTTTAGAA AAATATTCTAAGAATTTAAATGACCTGGCCAAAAAAGGAAAAATTGATCCTGTCATCGGTAGGGATGAAGAAATCAGGAG GGTCTTACAAATTTTGGCAAGAAGGACCAAAAATAATCCTATTTTATTGGGAGAACCGGGGGTAGGAAAAACTGCCATTG TAGAAGGTTTGGCCCAAAGAATTGTAAGTGGAGATGTTCCTGAAAACCTTAAAAGCAAAACCCTTATTTCATTAGATATG GGGCTTTTGGTGGCAGGGGCTAAATACAAAGGAGAATTTGAAGAGCGTCTAAAAGCAGTCATTAAGGAAGTAACGGACTC TGACGGTGAAATTATCTTATTTATTGATGAGATCCATACCTTGATAGGGGCCGGAGGTGGAGGAGAAGGTGCAATGGATG CGGCTAATTTATTGAAACCGGCCCTGGCTAGAGGAGAGCTACATGCCATTGGTGCAACAACTTTGAAAGAATACCAGAAG TACATTGAAAAGGATAAAGCACTTGAGCGTCGTTTCCAGCAAGTGGTGGTAGATGAGCCGGATGCTGCAGATGCCATTTC CATTTTAAGAGGTATAAAGGACAAGTATGAATTGCACCATGGTGTAAGGATCAAAGATGATGCAGTTATTGCCGCAGTAG AGCTTTCACAACGCTATATATCGGATCGTTATTTGCCCGATAAGGCCATCGATTTAATGGATGAAGCAGCGGCCAAATTA AGGATGGAAATTGACTCTCTTCCTCAAGAATTGGATGAGCTGAACAGACGTATAATGCAGCTGGAAATAGAAAGGGAGGC CATTAGGCGTGAAAAAAATAAGGACAAGGAGAGTGTTCTAAGTAAAGAACTTGCAGACCTATCTGAAAAGAGGCAAGAAC TGAAGGCGAAATGGGAAGGTGAAAAAGCCGTAATTCAGGGCATTCAAAGGGAAAAAGAGAACATTGACAAATTTAAAATA GAAGCTGAACAGGCGGAACGAAGTGGTGACTTTGGAAAGGTTGCTGAGATCCGCTATGGGAAAATTGTGGATAGTGAGCA AAAGCTGGAATCTTTTAAAGAACAGCTGAAGGTGATGCAAGAAAATTCCACCTTGCTTAAAGAGGAGGTAGATAGTGAAG ACATTGCGGCTGTGGTCAGTAAGTGGACAGGTATCCCTTTGTCCAAAATGATCCAAAGTGAAAGAGAGAAATTGCTTCAT TTGGAAGAGGAATTAGGCAAGCGCGTGGCTGGTCAGAAGGAAGCTATTACTGCGCTTTCGGATGCAGTAAGAAGAAGCAG GGCAGGTTTGCAGGATCCGAAGCGACCTATAGGTTCATTTATATTCTTAGGTACTACAGGAGTTGGTAAAACAGAATTAG CCAAAGCACTGGCAGAATACCTGTTTAGCGATGAGAATGCAATGGTAAGGATCGACATGTCTGAATATCAAGAAAGGCAT GCAGTAAGCAGATTGGTTGGAGCACCTCCAGGGTATGTAGGCTATGATGAAGGTGGTCAACTAACAGAAGCAGTAAGAAG GAAGCCTTACTCCGTGGTATTGCTTGATGAAATTGAAAAGGCTCACCCGGATGTGTTCAATATTCTCCTTCAAGTTTTAG ATGATGGTAGGCTTACCGACAATAAAGGAAGGATAGCCAATTTCAAGAACACAATTATTATCATGACCACAAATATTGGA TCTCATTTAATTCAGGAACGGTTTGAGAGCCTCAACGAGAGCAATAAGGAAGCAGTGCTGGAAAGTACAAAAGAAGAGGT TTTCAATTTATTGAAAAAATCTGTGCGTCCTGAGTTCTTGAATAGAATTGATGAAACCATCATGTTCGAGCCACTTAACA GAAAGATTCTTCGAAAAATTGTGGATATCCAATGGAGAGAAATCCAACAACGCTTAGCGGAATCGGGTATCGAAATAGAT GCAACCCAAGATGTGTTGGATTATTTAGGGGAAGTTGGGTTTGATCCTCAATTTGGTGCCAGACCATTAAAGAGAACCAT GCAACGCTTGGTATTGAATGAGTTGTCCAAACAAATTTTGAGTGGATACATCAAAAATGATAGTGCTGTTTTGGTGGACT TGGATGCCGAAAAGCAAGTCTATTTCAAAAACGTGGACCATGTAGAGATAAGTTAA Protein sequence : MDFKQFTIKSQEVIQKALELCTAEQQQLIEPAHLLKGIVQVDANVTDFIFQKLGINSGLILQKLDEIINQYPKVSGQQPY LSNATNEVLTQAKKYLKTFGDEFVAVEHLLLGVLAGSEKVAQLLKGQGLNEKKLIEVIKELRKGNKVTDQNAESKYRSLE KYSKNLNDLAKKGKIDPVIGRDEEIRRVLQILARRTKNNPILLGEPGVGKTAIVEGLAQRIVSGDVPENLKSKTLISLDM GLLVAGAKYKGEFEERLKAVIKEVTDSDGEIILFIDEIHTLIGAGGGGEGAMDAANLLKPALARGELHAIGATTLKEYQK YIEKDKALERRFQQVVVDEPDAADAISILRGIKDKYELHHGVRIKDDAVIAAVELSQRYISDRYLPDKAIDLMDEAAAKL RMEIDSLPQELDELNRRIMQLEIEREAIRREKNKDKESVLSKELADLSEKRQELKAKWEGEKAVIQGIQREKENIDKFKI EAEQAERSGDFGKVAEIRYGKIVDSEQKLESFKEQLKVMQENSTLLKEEVDSEDIAAVVSKWTGIPLSKMIQSEREKLLH LEEELGKRVAGQKEAITALSDAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEYLFSDENAMVRIDMSEYQERH AVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGRIANFKNTIIIMTTNIG SHLIQERFESLNESNKEAVLESTKEEVFNLLKKSVRPEFLNRIDETIMFEPLNRKILRKIVDIQWREIQQRLAESGIEID ATQDVLDYLGEVGFDPQFGARPLKRTMQRLVLNELSKQILSGYIKNDSAVLVDLDAEKQVYFKNVDHVEIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 3e-105 | 43 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-105 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cycma_2517 | YP_004774487.1 | ATP-dependent chaperone ClpB | VFG2084 | Protein | 2e-101 | 42 |
