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Name : Cycma_2423 (Cycma_2423) Accession : YP_004774396.1 Strain : Cyclobacterium marinum DSM 745 Genome accession: NC_015914 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 2831538 - 2832815 bp Length : 1278 bp Strand : - Note : PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase; COGs: COG0172 Seryl-tRNA synthetase; InterPro IPR015866:IPR002314:IPR002317; KEGG: mtt:Ftrac_2789 seryl-tRNA synthetase DNA sequence : ATGCTTCAGGTAAATGAAATAAGAGCAAACTTTGCGCATGCTTGCGAAAGGCTTAGCGCCAGGAATATTGAAAATCCTGA AGAATTGCTCGGGAATGTATTAAAGTTAGAAGACCTAAGAAAACAAATCCAACTCGACAGAGACAATCTTCAGGCTGAAT CCAATACTATCTCTAAGCAAATTGGCCAATTAATGAAGGCCGGAAATAAAGCGGAAGCAAATAAGATAAAGGAGAGAACT TCTGAGATTAAGCAACAGGTAAAAACGCTTGAAGACCGTTATTCTCAGACAGAAAAAGAACTTACCCAATTACTCTATAC CATTCCCAATATCCCTCATGCATCTGTCCCTGCCGGCAACTCAGAAACAGATAATGAAGTGGTGCTGGAAAATGGAACAA TCCCCATTCTTGAAGACAGTAATAAAAGCCCACATTGGGATTTGATAAAAAAGTACGACATCGTAGATTTTGAATTGGGG GTCAAGATAACCGGTGCAGGGTTTCCTGTTTATAAAGGAAAAGGCGCTAAATTACAAAGAGCTTTGGTCAATTTTTTCTT GGATGAGGCAGAAAAAGCCGGTTATGCGGAGGTACAACCACCAATTTTAATCAATGAAGAAAGTGGCTACGCCACCGGCC AGCTTCCTGACAAGGAGGGGCAAATGTACTTTGCCCAAGAAGATGGGCTTTACTTAATCCCTACTGCAGAAGTTCCCATT ACAAATATGTACCGTGGGTCCATCTTGCAAGAGGAGGAATTGCCTATCAAAAACACAGGCTATACACCTTGCTTTAGAAG AGAGGCAGGTAGCTGGGGAGCCCATGTAAGGGGCTTGAATAGGCTACACCAATTCGATAAAGTAGAAATAGTACAGATAA CTCATCCGGACAACTCTTACAAAACCCTTGACGAGATGAGCCTTCATGTACAAGGTTTGCTTCAAAAACTCGAATTACCA TACAGGGTATTAAGGTTATGTGGGGGTGATTTGGGTTTTACTTCTGCCTTGACTTTTGACATGGAGGTTTTTTCTGCAGC GCAGGAAAGGTGGTTAGAGGTTAGTTCTGTTAGTAACTTCGAAACCTATCAATCCAATCGCTTGAAGTTGCGATTTAAAA ATCAAGACAAAAAAAGTGTATTGGCGCATACGCTCAATGGTAGTGCCCTAGCTCTCCCAAGAATTATGGCAGCTATTCTG GAAAACAATCAAGGTGAAGAAGGAATCAAAATGCCTAAAGCTTTGGTACCTTATTTAGGATTTGACATCCTAAAATAA Protein sequence : MLQVNEIRANFAHACERLSARNIENPEELLGNVLKLEDLRKQIQLDRDNLQAESNTISKQIGQLMKAGNKAEANKIKERT SEIKQQVKTLEDRYSQTEKELTQLLYTIPNIPHASVPAGNSETDNEVVLENGTIPILEDSNKSPHWDLIKKYDIVDFELG VKITGAGFPVYKGKGAKLQRALVNFFLDEAEKAGYAEVQPPILINEESGYATGQLPDKEGQMYFAQEDGLYLIPTAEVPI TNMYRGSILQEEELPIKNTGYTPCFRREAGSWGAHVRGLNRLHQFDKVEIVQITHPDNSYKTLDEMSLHVQGLLQKLELP YRVLRLCGGDLGFTSALTFDMEVFSAAQERWLEVSSVSNFETYQSNRLKLRFKNQDKKSVLAHTLNGSALALPRIMAAIL ENNQGEEGIKMPKALVPYLGFDILK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-74 | 44 |
