Gene Information

Name : Cycma_2397 (Cycma_2397)
Accession : YP_004774370.1
Strain : Cyclobacterium marinum DSM 745
Genome accession: NC_015914
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : R : General function prediction only
COG ID : COG4221
EC number : -
Position : 2802726 - 2803457 bp
Length : 732 bp
Strand : +
Note : PFAM: short chain dehydrogenase; COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198; KEGG: gfo:GFO_3019 short-chain dehydrogenase/reductase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydroge

DNA sequence :
ATGGAATTTGAAAATAAAGTTGCAGTAATTACTGGTGCCAGTAGTGGTATTGGCAAAGCAATAGCTACCACGCTTTCCGA
AAATGAATGTAAGGTCATTTTGGCAAGTAGAAGCATTGAAAAGTTAAAAAATATCCAAGCAAAATTGCCTCATGAAAGCA
TGGCGGTGGAAATGGATGTAAGTGATAGTCAGAGTGTGTCCCAGGGTTTTAAGAAAATCAAGGACAAATACAGTCGTATT
GATATCTTGGTAAATGCTGCCGGTGTAATGCCTTTGAGCTATATGAAGAACAGGCACCTTGAGGAATGGTTGCAGACCAT
AGATGTAAATGTGAAGGGAGTGCTTCGCTGTATCTATGAAGTATTGCCGGAAATGAAGCGCCAAAAGTCCGGACATATTG
TAAACATTACATCCGTGGATGGCAAAGAGTTGTATCCGGGAGGAGCCATTTATGGGGCGTCAAAAGCTGCGCTTATTGCC
CTGTCAAGAGCCATGCGAATGGAGTTGTCTCCGGAATTTAATATTCGGGTGGCCTCTATTGAGCCGGGAACTGTAGCCAC
GAATCTAAGAGATGATATAACCGACAAAGAATTGCTGGAGGACAAAGATTATGGGGGAGATGAGGCCAAGCTTCAACCGG
AAGACATTGCTCAGGCTGTGTTATATGTCTTAAATCAGCCAGTCACAGTCAATGTTAATGAATTATTGATCAAACCTACC
GGGAAAGCCTAG

Protein sequence :
MEFENKVAVITGASSGIGKAIATTLSENECKVILASRSIEKLKNIQAKLPHESMAVEMDVSDSQSVSQGFKKIKDKYSRI
DILVNAAGVMPLSYMKNRHLEEWLQTIDVNVKGVLRCIYEVLPEMKRQKSGHIVNITSVDGKELYPGGAIYGASKAALIA
LSRAMRMELSPEFNIRVASIEPGTVATNLRDDITDKELLEDKDYGGDEAKLQPEDIAQAVLYVLNQPVTVNVNELLIKPT
GKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC20627.1 hypothetical protein Not tested Internalin Protein 3e-33 41