Gene Information

Name : Cycma_1939 (Cycma_1939)
Accession : YP_004773918.1
Strain : Cyclobacterium marinum DSM 745
Genome accession: NC_015914
Putative virulence/resistance : Unknown
Product : aspartate-semialdehyde dehydrogenase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0136
EC number : -
Position : 2260223 - 2261212 bp
Length : 990 bp
Strand : +
Note : PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms); COGs: COG0136 Aspartate-semialdehyde dehydrogenase; InterPro IPR000534:IPR01228

DNA sequence : 
ATGAAGTTAGCCGTAGTTGGAGCCACCGGATTGGTAGGTTCAGAAATCCTAGAAGTGCTCGAAGAGCACAATTTCCCTTT
CGATGAATTATTGTTGGTTGCCTCTGAGCGTTCTGCAGGGAAAAAGATTGCTTATAAGGGTAAGGAGTATACGGTAATTG
GTCTCAAACAGGCAGTGGCAGAAAAGCCAGACGTGGCTATTTTTTCAGCCGGTGGAGGAACTTCTCAAGAATGGGCACCC
CAGTTTGCTGAGGTAGGTACAATCGTGATTGACAATTCTTCAGCATGGAGAATGGACCCAACAAAAAAATTGGTAGTTCC
GGAAATCAATGGCAAGAGTCTTAGAATTGATGACCGTATCATCGCTAATCCTAATTGCTCTACCATTCAAATGGTATTAG
CTTTGGCTCCATTGAGAGAAAAATATGGCATCAAAAGAATTGTGGTTTCTACCTATCAGTCCGTTACCGGAACGGGTAAA
GATGCAGTAGATCAGATGATGGCAGAAAGAAATGGAGAAAAAGCCGATATGGTTTATCCCTATAAAATTGATTTGAATGT
ATTGCCTCATATCGATGTATTCCAAGAAAATGGATACACCAAAGAGGAAATGAAGATGATTAATGAAACCAAAAAAATCT
TTGGGGATGACTCCATTCAGGTAACGGCTACTGCTGTGAGAATTCCTGTAATGGGTGGTCATTCAGAAGCTGTTAATGTG
GAATTCCACAATGATTTTGACTTGGCAGAAGTCAAAGAATTGTTGACCAAGACTCCGGGAATTATTGTAGAAGATGATCC
GGCAAATAATATTTATCCCATGCCATTGAATGCGCACAAAAAGGATGAGGTGTTTGTGGGAAGATTAAGGAGAGATGAAA
CACAAGCGAATACCCTAAATATGTGGATTGTAGCCGATAACCTAAGAAAAGGGGCAGCAACAAATGCAGTTCAGATAGCT
GAGTATTTACTGGAACACAGCATGGTTTAA

Protein sequence : 
MKLAVVGATGLVGSEILEVLEEHNFPFDELLLVASERSAGKKIAYKGKEYTVIGLKQAVAEKPDVAIFSAGGGTSQEWAP
QFAEVGTIVIDNSSAWRMDPTKKLVVPEINGKSLRIDDRIIANPNCSTIQMVLALAPLREKYGIKRIVVSTYQSVTGTGK
DAVDQMMAERNGEKADMVYPYKIDLNVLPHIDVFQENGYTKEEMKMINETKKIFGDDSIQVTATAVRIPVMGGHSEAVNV
EFHNDFDLAEVKELLTKTPGIIVEDDPANNIYPMPLNAHKKDEVFVGRLRRDETQANTLNMWIVADNLRKGAATNAVQIA
EYLLEHSMV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDB402_0195 YP_005126708.1 aspartate-semialdehyde dehydrogenase Not tested Not named Protein 2e-45 41