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Name : Cycma_1935 (Cycma_1935) Accession : YP_004773914.1 Strain : Cyclobacterium marinum DSM 745 Genome accession: NC_015914 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctM Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 2252067 - 2253341 bp Length : 1275 bp Strand : - Note : PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: hel:HELO_1150 TRAP transporter large transmembrane protein; PFAM DNA sequence : ATGACGGCACTTTTATTTATTGTCTTTTTGGTTCTATTGGCCATCGGATTTCCAATCGCCTTTGCCTTAGGCATTTCTGC CTTTACCTATTTGCTGTTCAGTGATATCCCTTTAATGGTGATTCCTCAAAAAATGTATGCAGGCATTGATGTATTTGTGT TGCTATCTATTCCCGGCTTTATATTGGCAGGAAACTTAATGAATGCCAGTGGCATAACAGGCCGTATTATTAATTTTTGC AATGCGCTATTGGGCCATATCAGAGGTGGCTTGGGATTGGCCAATGTGGGTGCTTCTATGCTATTTGGTGGTATCTCCGG AACGGCCATTGCCGATACTGCCAGCATTGGTTCGGTAATGATTCCCGCCATGAATAAAGAAGGTTATGATGTCCCTTTTT CATGTGCTGTGACGGCTTCCTCATCCACCATAGGACCTGTTATCCCTCCCAGCTTACCCATGATCATTGCCGCCACGCTT ACCGGGCTTTCCGTTGGTAAGCTATTTGTCGCTGGAATTGTTCCCGGTTTGCTATTAGGGGTAGGATTTATGTTGATTAC CTACCTTATTTCTGTGAAAAGAAAATATCCCAAAAGACCTCGGAAAACATTCGGCTTCGTTTTCAAAAGCTTTTTTCAGG CATTTTGGGCTTTAATGATGACTGTAATAATTCTTTTCGGCATCATAGGGGGCGTTTTTACACCTACTGAAGCATCTATT GTAGCAGTAATTTATGCGATAGCCATCGGTCTTTGGGTTTACAAAGAATTAAAAATAAAAATGATTCCGGCCATATTGCT TCAGTCAGCCAAAACTACTGCTGCATTGATGGTGCTGGTAGGCTTCGCCAATCTCTTTGCCTGGATCATGACGGTGGAAG AGTTACCACAGTTGATAGCCAATAGCTTACTGGAGCTGACAAGCAATAAATTTATGCTGCTCTTATTAATCAACCTCTTG TTAATTTTTGTTGGGGCCTTTATGGAAACCATTGCGGCCTTGTTGATTCTATTCCCGGTTTTGCTTGGTGTAGCGGTAAA TGTAGGTGTAGATCCGGTTCAGTTTGCCATTATCATGGTTTTTAATCTGGTGATTGGGCTGACCACGCCACCAGTAGGTG TTTGTTTATTTGTAGCATCCAGTATTGGAGGTATTTCTCTTGAAAAAATAGCCGTGGCCGGCTTGCCATATTTGATGGTA AGTATTCTTGTCCTCTTAATGATCACCTATATCCCCGAAGTAAGCCTCTGGTTACCGGGATTGTTTTATGAATAA Protein sequence : MTALLFIVFLVLLAIGFPIAFALGISAFTYLLFSDIPLMVIPQKMYAGIDVFVLLSIPGFILAGNLMNASGITGRIINFC NALLGHIRGGLGLANVGASMLFGGISGTAIADTASIGSVMIPAMNKEGYDVPFSCAVTASSSTIGPVIPPSLPMIIAATL TGLSVGKLFVAGIVPGLLLGVGFMLITYLISVKRKYPKRPRKTFGFVFKSFFQAFWALMMTVIILFGIIGGVFTPTEASI VAVIYAIAIGLWVYKELKIKMIPAILLQSAKTTAALMVLVGFANLFAWIMTVEELPQLIANSLLELTSNKFMLLLLINLL LIFVGAFMETIAALLILFPVLLGVAVNVGVDPVQFAIIMVFNLVIGLTTPPVGVCLFVASSIGGISLEKIAVAGLPYLMV SILVLLMITYIPEVSLWLPGLFYE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 2e-55 | 43 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 2e-55 | 43 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 2e-55 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cycma_1935 | YP_004773914.1 | TRAP dicarboxylate transporter subunit DctM | VFG1110 | Protein | 9e-56 | 43 |
