Gene Information

Name : Cycma_1755 (Cycma_1755)
Accession : YP_004773740.1
Strain : Cyclobacterium marinum DSM 745
Genome accession: NC_015914
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 2042893 - 2043360 bp
Length : 468 bp
Strand : +
Note : PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424:IPR011344; KEGG: dfe:Dfer_4439 single-strand binding protein; PFAM: Primosome PriB/single

DNA sequence :
ATGGCAGGAGTTAATAAAGTAATTTTATTGGGTAATCTTGGTGCAGATCCTGAAGTCAAGCACCTAGAAGGAGATAAGGT
AGTAGCCAACCTTAGACTTGCCACTACTGAATCTTATAAGGACCGTAGCGGCAACCGTGTAGAAAACACGGAATGGCATG
ACTTGGAATTGTGGGACGGTCAGGCAAGAGTAGCCGAACAATACTTAAAAAAAGGCAGTCAAATTTACGTAGAAGGCAAA
ATAAAATCTGATACTTGGCAGGACGATCAAGGCAATAACCGTAAAAGAACCAAGATTAGGGTTCAAAGTTTTACCATGCT
TGGATCAAGAAACAGTGGGGCCGACAATGCTCAAGGCGGCGGCCAATCAATGCCTGCACAAAACAGCAATCCGAACACAG
GAATGAGTAGCAATACTTCACCTGCTTACGATTCCGGAGACAATGACGCCGATGATTTACCATTTTGA

Protein sequence :
MAGVNKVILLGNLGADPEVKHLEGDKVVANLRLATTESYKDRSGNRVENTEWHDLELWDGQARVAEQYLKKGSQIYVEGK
IKSDTWQDDQGNNRKRTKIRVQSFTMLGSRNSGADNAQGGGQSMPAQNSNPNTGMSSNTSPAYDSGDNDADDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 1e-19 45
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 8e-21 42
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 8e-21 42
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 6e-21 42