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Name : SFBM_0021 (SFBM_0021) Accession : YP_004770546.1 Strain : Candidatus Arthromitus sp. mouse isolate Genome accession: NC_015913 Putative virulence/resistance : Unknown Product : type I restriction-modification system, restriction protein Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 27530 - 30565 bp Length : 3036 bp Strand : + Note : - DNA sequence : ATGTCATACACAGAAGCGAATTATGAAAATGCTTTGATTGAGGTTTTCAGAGATACTCTTTCTTATAATTATTTATACGG ACCAGATATAAGCCGTGATTATTCAGATGCTATTTATATGGATGAGCTTACACCATCTCTTAAGAGAATAAACAAAGACA TCCCACAATCTGCAATTAATGAATGCATAAATAAACTAAGAAACATTGAAGGTGGAACCTTACTTGATAAAAATAGAATA TTTATGAATTATCTACAAAATGGAGTGAGCGTCAACTGTTTTAATAACGGAAATCAGGAAAGCTATTTAGTTAAGCTTGC CGATTATAACTGCCTAGAGAAAAATACCTTCACAATAGTTAATCAGTGGACAATTGTTGAAAATAGTGAGAAGAGACCAG ACCTTATTTTATTTTTAAATGGTATTCCTATTGTGGTATTTGAGCTTAAGTCTCCAAGTCGTGAAGAGACAAGCGTGTCA GAAGCATATAATCAGCTCAGAAATTATATGTACGAGATACCTTCTCTTTTTAATTACAATGCTTTTTTAGTTATGAGTGA TCTTGCAGTATCAAAGGCTGGAACTATAACAAGTAGTGAAGATAGATTCATGGAGTGGAAAACTAAGGATGGAAGCTATG AAAATACCTCTTATGCTCAGTTTGATACTTTTATTGAAGGAATGTTTGATAAAGCTCGCCTACTTGATATCATCAAAAAT TTTATATGCTTTTCTGAAAATTCAAAAATATTTTCAGCCTATCATCAATATTTCGCTGTTAGAAAAGCTATTAAATCGAC TCTTAATGCTTTAGAAAGCGATGGAAAAGCTGGAGTATTTTGGCACACACAAGGGAGTGGTAAATCCCTATCTATGCTAT TTTATGCTCATCTTCTTTGTGAAACCATAAATTCTCCAACTATACTTGTACTTACAGATAGAAATGATTTAGATGATCAA CTCTTCTCTCAGTTTTCTAAATGTAAAGATTTTCTTTATCAAGTTCCAAATAAGGCAGAAAGCCGTGAGCATTTGAAAAA ACTTCTTGCTGGAAGAGAGGCAAATGGAATCATTTTTTCAACAATTCAAAAGTTTGAGGAAAGTACAGAGCCTCTATCAG AGAGAAAAAATATTATAATCATGGCAGATGAGGCCCATAGGGGACAGTATGGATTAGATGAGAAAGTTGATAAAAATACA GGGCGTATAAGTTTTGGTATAGCTAGAATAATACGAGATAATTTCCCTAACGCAACATATATAGGTTTCACAGGAACTCC GATTTCATTAAAAGATAGATCTACAATTGAGGTGTTTGGAAATTATATTGATATATATGATATGACTCAAGCTGTAGAAG ATGGAGCAACTCGCCCAGTTTATTATGAAAGCCGTGTAATTAAATTGAATTTGGATAACTCTATATTGGAGATGATAGAT AAAGAGTATGAAATTTTATCTAATAACGCTGAGATTCATGCAATTGAGAAGAGTAAAAAAGAACTTGGAAGATTAGAGAG TATACTTGGAGCAGATCAAACTATAGACTCTTTAACTAGAGATATCGTAATGCACTATGAAGAAAACAGACAGTATGAAT TAACAGGTAAAGCAATGATAGTTGCATATTCTCGCCCTATTGCTATGAAAATTTATCATAAAATTTTAGAATTAAAGCCT GAATGGGAAGAAAAAGTATATGTTGTTATGACTTCAGGAAATAACGATCCAGAAGATTGGAGAAAAATAATAGGAAATAA ACGTTATAAGGATGAACTAGCCAAAAAATTTAAGGATAATGGATCTTCATTTAAAATAGCAATTGTTGTTGATATGTGGC TTACTGGATTTGATGTTCCATCTCTTGCAACTATGTATATATATAAACCTATGAGTGGTCATAATTTAATGCAGGCTATA GCTAGAGTTAATAGAGTTTATAAAAATAAAGAGGGCGGACTTATAGTTGATTATATTGGAATTGCAGGAGCTTTGAAAAA GGCGATGAGCGATTACACAAAGAGAGATAAGGTAAATTATGGGGAGAGTGATATCTCAAAAATTGCTTATCCAAAGTTTA TAGAAAAACTTGAGGTATGTCGTGCTCTTTTGCATGGGTTTGATTATTCCTCATTTATGCTTAAATCATTAACAGATCTT ACGCGTGCAAAACTTATAAGTGGAGGCGTTAACTTTCTATCAGATCCATCAAGAAAGGAGGATAAAAAATTCTATATAAA AGAGTCGCTTCTCTTGCGTCAATCTGTTTCACTTTGTCGCTCTATTTTAACTAAGGATCAAAGACTTGAATCTGCATATT TTGAAGCACTTCGTACACTACTTACACGCATAACAGGAGAAAATAAACCTCTTTCTTTAAAAGATATAAATAAGCATATT AATGACTTATTAAAAGAGAGTATAAAAAGTGATGGTATTATAAATTTATTTTCTGATATTGATATTGGGGTTTCTATATT TGATGAAAAATTTTTAGAAGAAGTTTCAAATATGAAAGAGAAGAATTTGGCAGTTGAAATGTTAAAGAAACTTTTAAATG AACAGATTTCAGTATATAAAAGGAATAATATTGTTAAATCACAAAAATTTTCGGAAATGTTAAATAAGGCTATGAGGTTA TATATAAATGGAATGATCACAAATGAAGAGATAATAGAAGAGCTATTAAAGATGGCACGAGATATATCACGCTCCTCAGA AGAGGCAGAATCACTTGGACTTAGTGATGAGGAGATGGCATTTTATGATGCACTAACTCGACCAGAGGCTATAAAAGATT TTTACACAAATCAAGAACTTGTAGCACTCACTCGTATGCTTACAGACAGCTTAAGAAGAAGTAGAACTATAGATTGGCAG AAAAAGGATACTGCGAGAGCAAAAATGCGTAGAATGGTTAGAAAACTTTTAAAAGACTATGATTATCCACCAAAAGGTTT AGAGGATGCCGTGGCAACAGTATTATCTCAATGCGAAATTTGGGCAGATTTTGGAGAAGAAAGTTATAGAGTTTAA Protein sequence : MSYTEANYENALIEVFRDTLSYNYLYGPDISRDYSDAIYMDELTPSLKRINKDIPQSAINECINKLRNIEGGTLLDKNRI FMNYLQNGVSVNCFNNGNQESYLVKLADYNCLEKNTFTIVNQWTIVENSEKRPDLILFLNGIPIVVFELKSPSREETSVS EAYNQLRNYMYEIPSLFNYNAFLVMSDLAVSKAGTITSSEDRFMEWKTKDGSYENTSYAQFDTFIEGMFDKARLLDIIKN FICFSENSKIFSAYHQYFAVRKAIKSTLNALESDGKAGVFWHTQGSGKSLSMLFYAHLLCETINSPTILVLTDRNDLDDQ LFSQFSKCKDFLYQVPNKAESREHLKKLLAGREANGIIFSTIQKFEESTEPLSERKNIIIMADEAHRGQYGLDEKVDKNT GRISFGIARIIRDNFPNATYIGFTGTPISLKDRSTIEVFGNYIDIYDMTQAVEDGATRPVYYESRVIKLNLDNSILEMID KEYEILSNNAEIHAIEKSKKELGRLESILGADQTIDSLTRDIVMHYEENRQYELTGKAMIVAYSRPIAMKIYHKILELKP EWEEKVYVVMTSGNNDPEDWRKIIGNKRYKDELAKKFKDNGSSFKIAIVVDMWLTGFDVPSLATMYIYKPMSGHNLMQAI ARVNRVYKNKEGGLIVDYIGIAGALKKAMSDYTKRDKVNYGESDISKIAYPKFIEKLEVCRALLHGFDYSSFMLKSLTDL TRAKLISGGVNFLSDPSRKEDKKFYIKESLLLRQSVSLCRSILTKDQRLESAYFEALRTLLTRITGENKPLSLKDINKHI NDLLKESIKSDGIINLFSDIDIGVSIFDEKFLEEVSNMKEKNLAVEMLKKLLNEQISVYKRNNIVKSQKFSEMLNKAMRL YINGMITNEEIIEELLKMARDISRSSEEAESLGLSDEEMAFYDALTRPEAIKDFYTNQELVALTRMLTDSLRRSRTIDWQ KKDTARAKMRRMVRKLLKDYDYPPKGLEDAVATVLSQCEIWADFGEESYRV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 41 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 41 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 41 |
