|
Name : SFBM_0018 (SFBM_0018) Accession : YP_004770543.1 Strain : Candidatus Arthromitus sp. mouse isolate Genome accession: NC_015913 Putative virulence/resistance : Unknown Product : type I restriction-modification system, methyltransferase subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : - Position : 24535 - 26040 bp Length : 1506 bp Strand : + Note : - DNA sequence : ATGAGTGTAAAGAAAAATAATACGGCATCGATTAGTTTTGAGCAGCAGATTTGGTCTGCTGCTGATATTTTAAGAGGTAA TATGGATGCAGCAGAATACAAGCACGTTGTTCTCGGGCTTATATTCCTTAAGTACATATCTGATAGTTTTGAGAGAAGAT ATCAGGAATTATTAAGAGATGATGATGATGTTGAAGATAAGGATGCTTATACTGAAGTTAATGTATTCTTTGTTCCTCCT GAGGCAAGGTGGAGCGTAATACAAGCCTCTGCTCACAAAGAGGAAATAGGTATTGTAATAGATAATGCCATGAGAGCAAT TGAGAAAGAGAATAGGAGATTAAAGGATATTCTTCCCAAAAATTATTCAAGAGAGGAACTTGATAAACGCCGTCTTGGGA ATGTTGTTGACTTATTTACAAATATTCATATGATAGATCATGGACGGGACAAGGATATATTAGGGAGAACATATGAGTAT TGCCTTTCTAAATTTGCAGAGCAAGAAGGAAAGAGAGCTGGAGAATTTTATACCCCTTCTTGTATTGTTAGAACGCTCGT TGAAATATTAGAGCCATTTAATGGTAGAGTATATGATCCATGTTGTGGTTCTGGGGGAATGTTTGTGCAGTCTGCAAAGT TTGTTGAGCATCATTCAGGGAATATAAATAATTTATCAATATTTGGTCAGGATTCAAATCCAACGACTCGTAAAATGGCA ATTATGAATCTTGCAATTAGGGGTATAGAAGGGGACATTGGACCTCATAGTGCGGATACATTTTATAATGATTTACATAA AACGCTTAAGGCAGATTTTATATTATCAAATCCACCATTTAATCTTTCAAATTGGAATGATGGAAGTTTGAATGATGATG TTAGATGGTCTTATGGTTTGCCACCGTCTGGGAATGCAAACTTTTCTTGGCTTCAGCATATGATTCACCATCTTTCACCA AGAGGTAAGATCGGAATGGTTTTAGCAAACGGTTCTCTCTCATCTAAAAGTGGAGGCGAGGGGGATATTCGAAAAGGCAT AATTGAAGATGATCTTGTTGAAGGGATTGTTGCTATGCCGAGTCAATTATTTTATACAACTCAGATTCCTGTGTCATTAT GGATTATAAATAGGGATAAAAGTCAAAAGGGTAAAACTTTATTTATAGATGCAAGAGATATGGGAAAGATGGTAAATAGG AAATTAAGAGAGATGACAGAAGAAGATATTAAAAAGATTTCTGATACATTTCGTGCGTTTGAGGAAGGGACGCTTGAAGA TGTGAAAGGTTTCTGTGCAGTTGCAACAACTGAGAAGATATCAAAAGAGGATTATATTTTAACTCCTGGAAGATATGTTG GAATAAAAGATAGAGAAGATGATTCTGAAGGATTTGATGATAAGATGAAGAGACTCACTGGGGAACTTCGAGAGATGTTT AATAAATCTCATGAACTTGAAGAAGAGATTCGAAAAAGACTTGGGAGTATAGGATATGAAATATAA Protein sequence : MSVKKNNTASISFEQQIWSAADILRGNMDAAEYKHVVLGLIFLKYISDSFERRYQELLRDDDDVEDKDAYTEVNVFFVPP EARWSVIQASAHKEEIGIVIDNAMRAIEKENRRLKDILPKNYSREELDKRRLGNVVDLFTNIHMIDHGRDKDILGRTYEY CLSKFAEQEGKRAGEFYTPSCIVRTLVEILEPFNGRVYDPCCGSGGMFVQSAKFVEHHSGNINNLSIFGQDSNPTTRKMA IMNLAIRGIEGDIGPHSADTFYNDLHKTLKADFILSNPPFNLSNWNDGSLNDDVRWSYGLPPSGNANFSWLQHMIHHLSP RGKIGMVLANGSLSSKSGGEGDIRKGIIEDDLVEGIVAMPSQLFYTTQIPVSLWIINRDKSQKGKTLFIDARDMGKMVNR KLREMTEEDIKKISDTFRAFEEGTLEDVKGFCAVATTEKISKEDYILTPGRYVGIKDREDDSEGFDDKMKRLTGELREMF NKSHELEEEIRKRLGSIGYEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 5e-147 | 58 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 2e-147 | 58 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 6e-146 | 57 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 2e-111 | 46 |
