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Name : lysS (SFBM_1431) Accession : YP_004771932.1 Strain : Candidatus Arthromitus sp. mouse isolate Genome accession: NC_015913 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 1539443 - 1540915 bp Length : 1473 bp Strand : - Note : - DNA sequence : ATGGAATTTAATGAACAAGAGATAATACGCCGTAATAAACTCAGTGATCTTCAAGAAAAAGGAATGGATCCATTTAATGT TTATAAGGTAGATGTTTCAGATTATTCTAAGAATATAATTGATAATTATTTAGATTATGAAGGTAAGATTGTAAAGCTTG CTGGAAGAATTATGACTAAGAGAGGACAAGGAAAGGCAGGATTTATAACTATACAGGATACATTAGGGCAGATTCAAATT TTTATTAAAGTAGATATAGTGGGTAAAGAGACGTTAGATAGCGTTTTTTCTTATGATATAGGTGATATCATATGGGTTGA AGGTGAAGTGTTTAAAACTAAAGTTGGAGAAGTTACTATAAGAGTTTTAAAGATTGATTTGATATCAAAATCTCTAAGAG TTCTTCCAGAGAAGTTTCACGGTATAACAGATCCGGATTTAAGATATAGACACAGAGAAATAGATATAATAATGAATAGG GATGTTAAAGATGTTTTTTTAAAGAGAAGCAAGATAATATCTGAGATACGGTTGTTTTTAGATAATAGAGGGTATTTAGA GGCTGAAACTCCAATACTTTCCTTAATTGCAGGAGGTGCTGCGGCGCGTCCGTTTTTAACTCATCATAATACGCTTAATA TGGATATGTATTTGAGAATTGCAACAGAACTTTATTTAAAAAGGCTTATAGTTTCTGGATTTGATAAGGTTTATGAAATG GGTAAAAATTTTAGGAATGAGGGAATCGATATAAAACATAATCCAGAATTTACTATGATTGAGCTTTATGAAGCTTATTC TGATTATAATGATATGATGAGACTTACAGAAGATTTAATATCTAGCGTGTGTTTAAAAGTTTGTGGAAGTATGAAAGTTG AGTATCAGGGAACAGAGATTGATTTTACTCCTCCGTGGAGAAGGATAACTATGCTTGATGCTGTAAGAGAATATTCTGGT ATTGATTTTAAAACTTTAACAATAGAAGATTCTTATAATATTGCAAAAGAACATGAGCTTGAGTTTAAAAAGGATCTTAA AGATTGTTCTAAAGGTGAAATTTTAAATGCAATGTTTGAAAAATATGTGGAGAATAAATTAATACAGCCAACTTTTATTA TCGATTATCCAGTTGAAATATCTCCACTTACGAAAAAGAAAAGAGGAGATGATGATTTTACTGAAAGATTTGAAGGATTC ATATATGGTCGTGAAATATGCAATGCGTATTCAGAACTTAATGACCCTATAGTTCAGAGGGAAAGATTTTTAAAGCAAGA GCTTGAGCGTGAACTTGGAGATGATGAGGCTTATTCTATAGATGAGGATTTTATGTATTCTCTTGAGTATGGTATGCCTC CAACGGGTGGTCTTGGAATTGGAATTGATAGGATTGTAATGTTTTTGACGAATTCTTATTCTATAAGAGATGTAATATTA TTTCCTACAATGAAACCCTTAAGGAATGATTAG Protein sequence : MEFNEQEIIRRNKLSDLQEKGMDPFNVYKVDVSDYSKNIIDNYLDYEGKIVKLAGRIMTKRGQGKAGFITIQDTLGQIQI FIKVDIVGKETLDSVFSYDIGDIIWVEGEVFKTKVGEVTIRVLKIDLISKSLRVLPEKFHGITDPDLRYRHREIDIIMNR DVKDVFLKRSKIISEIRLFLDNRGYLEAETPILSLIAGGAAARPFLTHHNTLNMDMYLRIATELYLKRLIVSGFDKVYEM GKNFRNEGIDIKHNPEFTMIELYEAYSDYNDMMRLTEDLISSVCLKVCGSMKVEYQGTEIDFTPPWRRITMLDAVREYSG IDFKTLTIEDSYNIAKEHELEFKKDLKDCSKGEILNAMFEKYVENKLIQPTFIIDYPVEISPLTKKKRGDDDFTERFEGF IYGREICNAYSELNDPIVQRERFLKQELERELGDDEAYSIDEDFMYSLEYGMPPTGGLGIGIDRIVMFLTNSYSIRDVIL FPTMKPLRND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-96 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004771932.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 7e-97 | 45 |
