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Name : clpC (SFBM_1418) Accession : YP_004771919.1 Strain : Candidatus Arthromitus sp. mouse isolate Genome accession: NC_015913 Putative virulence/resistance : Virulence Product : negative regulator of genetic competence clpC/mecB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1524856 - 1527294 bp Length : 2439 bp Strand : - Note : - DNA sequence : ATGTTTGAAAAATTGACTGAAAGGGCTAGAAAAGTTATTAGTTATTCTGGTGATGATGCATTAAAATTAGGACATGGTTT TATAGGAACAGAGCATATATTATTAGGATTATTAAGAGAAGATGGTCCTGCACAGAAGATACTGAATTCATTTGATGTAT ATTATGATGATATTTTTAAAGAAATTAGAACTATATTGTCTCCAGGAGAGATAGAGATAAAGAATAGTGAAATACCATTG ACACCTAGAACTAAAAAAGTTATAGAAAGCAGCATAGATGAGGCTAAGAAACTGGGTCATAATCACGTATCACCTGAGCA TATATTATTGGCTATCATAAATGAACCTGATGGAGTTGCGTATAAGATATTGGATAAAAAGGGTGTATCTGTAGTAAAAA TATGGAATCAAACTATAAATGCATTAAATGTTACAATTGATGTGCAAAATCCACATGAAAAAGAGCAACAACTTAAAAAT CTACCGACTCCTGTGTTAGATCAGCATGGTAGAGATCTTACTAAACTGGCTAATGAAGGCAAATTGGATCCTGTTATCGG AAGAGATACAGAAACACAGAGGGTTCTTGAAATATTATGTCGAAGAATAAAAAATAATCCATGCTTGATAGGTGATCCTG GTGTGGGTAAAACTGCTATTATTGAGGGTTTGGCACAGAAAATAATAGAAGGCAATATTCCGGAAATATTAAAAAATAAA CGTGTTATAACTTTAGATTTATCGTCTTTAATTGCAGGAACAAAATATAGGGGTGAGTTTGAAGAAAGATTAAAAAAAAT AATGGAAGAGATAAAGAGGTCTAGGAATATAATTTTATTTATAGATGAGATACATACTATAATTGGTGCAGGTGGAGCTG AGGGGGCAATAGACGCATCTAATATATTGAAACCTGCTTTGGCTAGAGGTGAAATACAATGTATAGGGGCTACAACTATT GATGAGTATAGAAAGTATATAGAAAAAGATACGGCTCTTGAGCGGAGATTTCAGCCTATATTTGTTGGAGAACCTAATGA AAATGAAACTATAGATATATTGATAGGTATAAGAGATAAATATGAAACGCATCATAAAGTTAAAATCACTGATGAAGCTA TAAAATTTGCAGTTAGTTTATCAGTTAGATTTATTCCAGATAGATATTTACCAGATAAAGCTATAGATTTAATAGATGAG GCATCAGCTAAAATAAGAGTTAGAAATTTGACGGTTCCTATTGAAGTTAAGGAAATAGAGGAAGAGATAGCAAAAGTTGG TAAGGAGAAACAAGAAGCAATAACTTTGGAAGATTTTGAAAAAGCCGCATCTCTTAGAGATAAAGAACAGAAGCTTAAAG AAAGATTAGAAAATTCAAAAGAGAAGTGGAAAGTTGAAAAATATGATAAGGAATTTATACTTACTGAGCAAGAATTGGCA TCTGTTGTAGCTAGTTGGACTAAAATACCTGTTGAGAAATTAACACATACAGAGTCTGAGAAATTATTAAAATTAGATGA TATATTGAGGAGTAGAGTTATAGATCAAAATGAAGCTGTTATATCTGTTGCCAGAGCTGTTAAACGTGGACGTGTTGGAT TGAAGGATCCTAAAAGACCTATTGGATCATTTATATTTTTAGGCCCTACTGGAGTTGGTAAAACTGAGTTGTGTAAGGCT TTAGCAGATGCTGTTTTTGGGAGTGAAGATAATATTATAAGATTTGATATGTCTGAATTTATGGAAAAGCATACAGTATC AAAAATTATAGGATCACCTCCGGGATATGTTGGATTTCAAGAAGGAGGACAATTAACGGAAAAGGTAAGAAGATCTCCAT ATTCTATTATATTATTTGATGAAATAGAGAAGGCTCATCCAGATATATTTAATATAATGTTGCAAATTTTAGAAGATGGT CATTTAACTGATTCGAATGGCAAAAAAATTAGTTTTAAAAATACAATAATAATATTAACTTCAAATATAGGTGCAAATAT TATTAATAAAGATTCATCTTTGGGATTTGTTAATCATAAGAATGGTGATGAAGAAGTTTATAATAAAATTAAGGATAATG TTTTGAGTGAGCTCAAGAAAAGTTTTAGACCTGAGTTTTTAAATAGATTAGATGATATAATAGTATTTAAGCCATTAGAT AAAAAGAGTCTTGTAAAAATATTGGATAAGATGTTAGATGATTTTAAATCAAGAGTATTAAATCAGAATATAATAATTAA TTTTAATGATGATGTTAAAAATTATATACTTGAGAATAGCTCAAGTGAAAAATATGGAGCTAGACCATTGAGAAGGTCAA TAACTAAGTATATTGAGGATAGTTTATCTGATCAAATATTATTAGGGAACATTAAGGCTAATGATAGTGTGGAAGTTATA TTAAAGGATGATAAGATTTGTTATATAAAAAATACATAA Protein sequence : MFEKLTERARKVISYSGDDALKLGHGFIGTEHILLGLLREDGPAQKILNSFDVYYDDIFKEIRTILSPGEIEIKNSEIPL TPRTKKVIESSIDEAKKLGHNHVSPEHILLAIINEPDGVAYKILDKKGVSVVKIWNQTINALNVTIDVQNPHEKEQQLKN LPTPVLDQHGRDLTKLANEGKLDPVIGRDTETQRVLEILCRRIKNNPCLIGDPGVGKTAIIEGLAQKIIEGNIPEILKNK RVITLDLSSLIAGTKYRGEFEERLKKIMEEIKRSRNIILFIDEIHTIIGAGGAEGAIDASNILKPALARGEIQCIGATTI DEYRKYIEKDTALERRFQPIFVGEPNENETIDILIGIRDKYETHHKVKITDEAIKFAVSLSVRFIPDRYLPDKAIDLIDE ASAKIRVRNLTVPIEVKEIEEEIAKVGKEKQEAITLEDFEKAASLRDKEQKLKERLENSKEKWKVEKYDKEFILTEQELA SVVASWTKIPVEKLTHTESEKLLKLDDILRSRVIDQNEAVISVARAVKRGRVGLKDPKRPIGSFIFLGPTGVGKTELCKA LADAVFGSEDNIIRFDMSEFMEKHTVSKIIGSPPGYVGFQEGGQLTEKVRRSPYSIILFDEIEKAHPDIFNIMLQILEDG HLTDSNGKKISFKNTIIILTSNIGANIINKDSSLGFVNHKNGDEEVYNKIKDNVLSELKKSFRPEFLNRLDDIIVFKPLD KKSLVKILDKMLDDFKSRVLNQNIIINFNDDVKNYILENSSSEKYGARPLRRSITKYIEDSLSDQILLGNIKANDSVEVI LKDDKICYIKNT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_004771919.1 | negative regulator of genetic competence clpC/mecB | VFG0079 | Protein | 0.0 | 55 |
| clpC | YP_004771919.1 | negative regulator of genetic competence clpC/mecB | VFG0080 | Protein | 2e-143 | 51 |
