Gene Information

Name : SFBM_0107 (SFBM_0107)
Accession : YP_004770629.1
Strain : Candidatus Arthromitus sp. mouse isolate
Genome accession: NC_015913
Putative virulence/resistance : Unknown
Product : phage-related DNA helicase
Function : -
COG functional category : K : Transcription
COG ID : COG0553
EC number : -
Position : 127919 - 129259 bp
Length : 1341 bp
Strand : +
Note : similar to SNF2 domain protein

DNA sequence :
GTGGAATTTAGACCTCACAAATACCAAGAAGAAGCAATTAACAAGATAATTAAGATTGATAGATGTGGTTTATTTTTAGA
TATGGGATTGGGTAAAACGGTTATAACTCTAACAGCTATTAATGATTTAATGTTTAATCGCTTTGAAGTCAATAAGGTTG
TAATAATAGCACCTTTAAAAGTAGCAGAAGATACATGGGTTAAAGAGTTATCTAAGTGGGATCATTTAACTAATTTAAGC
ATGTCTCTTGTATTAGGAGATAAGAATAAGAGGATTAAGGCATTAGAGACACAAGCAGATATATATGTGATCAATAGGGA
GAATGTGTCTTGGCTTGTTACATATTTAGGTAGAGATTGGGATTTTGACATGGTGGTTATTGATGAGTTATCCAGTTTTA
AAAATCCATCTGCTAGTAGATTTAAGTCTCTTAAGAAAGTTATAGGTAAAAGTTCCAGGGTTGTTGGGTTGACGGGTACA
CCTAACCCTAATGGGTACATAGACCTTTGGGGTCAGATATACCTACTTGATAGTGGTGAGAGACTTGGTAAGACCTTGAC
TAGATTTAGGGATACTTATTTTGTACCTGATAAGAGAGATAGTTATAGGATATTTACCTATAAATTAAAATCTGGAGCGG
ATAAATTGATTAATAAAGAAATATCTGACATTTGTATAAGCATGAAGGCTGATGATTATTTGGATCTACCAGATAAGATA
TTTGTTAATCACGAAATAAGTTTAGAAAATAGGCGGTCTTATGATGAATTAGAGAAAGAATTTTATTTTGAGTTTGATAA
AGGATCTGAAGTTACAGCTGCATCTAAGTCAGTTTTAATTAATAAGTTATTGCAGTTATGTAATGGTGCAGTTTATACGG
ATGGAGATAAATATCAGGTAGTGCATGATGATAAATTGGACAAGTTGGAGGAGATAGTTGAGAGTACTCTAGATAGTCCT
ATTTTATGTTTTTATCAGTATAAGCATGATCTGGATAGGATAATAAATAGATTTGATTTTGCGAAAGAGTTATCACAAGA
TAATATCGATGCTTGGAATAAGGGTAAAATTAAATTACTACTTACCCATCCAGCGTCTAGTGCTTATGGACTTAATCTAC
AAGATGGCGGCAATGTTATTGTGTGGTTTGGTCTTCCTTGGAATCTAGAGCTATACCAGCAAGCTAATGCCAGATTACAC
AGACAAGGACAAAGGCGTAATGTGTTTATACATCATTTGATTTGTGCAAATACTGTTGAGGAGAGAGTGCTAGATACACT
ACAGCGTAAAGGTATAGTGCAGGATGAGTTATTAGATTACCTTGCTTTTAAATATAGATAA

Protein sequence :
MEFRPHKYQEEAINKIIKIDRCGLFLDMGLGKTVITLTAINDLMFNRFEVNKVVIIAPLKVAEDTWVKELSKWDHLTNLS
MSLVLGDKNKRIKALETQADIYVINRENVSWLVTYLGRDWDFDMVVIDELSSFKNPSASRFKSLKKVIGKSSRVVGLTGT
PNPNGYIDLWGQIYLLDSGERLGKTLTRFRDTYFVPDKRDSYRIFTYKLKSGADKLINKEISDICISMKADDYLDLPDKI
FVNHEISLENRRSYDELEKEFYFEFDKGSEVTAASKSVLINKLLQLCNGAVYTDGDKYQVVHDDKLDKLEEIVESTLDSP
ILCFYQYKHDLDRIINRFDFAKELSQDNIDAWNKGKIKLLLTHPASSAYGLNLQDGGNVIVWFGLPWNLELYQQANARLH
RQGQRRNVFIHHLICANTVEERVLDTLQRKGIVQDELLDYLAFKYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2070 YP_002747285.1 SNF2 family phage protein Not tested ¥ÕSeq4 Protein 5e-105 54
SAUSA300_1408 YP_494105.1 phage helicase Not tested ¥ÕSa2 Protein 7e-109 52
SH1779 YP_253694.1 hypothetical protein Not tested ¥ÕSh1 Protein 8e-114 52
MW1405 NP_646222.1 hypothetical protein Not tested ¥ÕSa2 Protein 3e-117 52
SAOV_0314 YP_005735831.1 putative DNA helicase Not tested ¥ÕSa1 Protein 7e-117 52