Gene Information

Name : SFBM_0104 (SFBM_0104)
Accession : YP_004770627.1
Strain : Candidatus Arthromitus sp. mouse isolate
Genome accession: NC_015913
Putative virulence/resistance : Unknown
Product : DNA-directed DNA polymerase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0749
EC number : -
Position : 122927 - 124846 bp
Length : 1920 bp
Strand : +
Note : -

DNA sequence :
ATGAGAACACTCGCGATAGATATTGAAACTTATAGCGATATAGATATTAAAAAAGCAGGGGTCTATGCTTACGCAGGATC
TACTGCTTTTACTATACTCTTATTCGCCTATAGGTATGATGACGAAGAAGTAAAATTAATTGATTTAACAGAGACAAAAA
CATTACCTCAAAGCATTATAGATGATCTTATTAATCCTAATATTATTAAGACAGCATATAATGCAAATTTTGAGAGGGTA
TGTTTATCTAAATTTTTAAATATTAAATTACCAATTGATGATTGGAGATGTACAGCAGTGCAAGCATCAATGTTAGGATT
ACCTAACAACCTCAAAGATGTAGCTAAGGTATTAAACCTAGAATCTCAAAAGGATTCTAAGGGTACAAGGCTTATAAATT
ATTTTTCAGTTCCTTATAAAGGGCAAAGACGTATGCCTAGTGAGGATATTATAAAGTGGGAGGAATTTAAAAGTTATTGT
ATCCAGGACGTAAAAGTGGAGTCTGCAATAAGAGATAGATTAAGTAAGTATCCAATATCAGACTCGGAGCAAGAGTTATA
CATAATAGATCAGATTATTAATGACAGAGGTATCAAGGTGGATGAGGTTTTTGTGGATAATGCCATAAGATTTGATGCAA
TCCACACAGACATATGTAAGCAAGCTTTTAATGAGTTAACTGGAGGAGTTAATCCTAAGTCAAGCACTCAAATCAAAGAG
TATTTAATTAATAGAGGTCTTAAGGTATCAAACGTTGATAAATCGACTATAGCCGATATCATAAAAGATACAGATGATAA
AGGGTTAAAACAAATACTTGATTTAAAACTAAAGCTTGGTAAGACATCAGTTAAAAAGTACGAGGCTATGAAAAGATGTA
CTTGTAGCGATGGGCGTATAAGAGGCTTATTACAGTTCTATGGAGCAAATCGTACAGGTAGATGGGCAGGGAGATTAGTA
CAAGTACACAACTTACCACAAAATCATTTGGATAATCTAGAGGATGTTAGGGGTTTAATAGTTAATGGGGATTATGATCT
GTTAGAGATGCTCTATGATAACATCCCAGATGTATTATCTCAACTTATAAGGACAGCTTTTATTCCAAGTGAGGGGAAAA
AGTTTATAGTATGCGATTTTTCAGCGATTGAAGCTAGAGTAATAGCATATCTAGCCGATGAAAAATGGAGGATAGATGTA
TTTAATACTCATGGGAAAATCTATGAAGCCTCAGCCGCTCAAATGTTTAAAGTACCTATTGAATCTATAACAAAATCCAG
TCCACTCAGGCAAAAAGGAAAAATTGCTGAGCTTGCACTCGGTTACGGAGGTAGCGTTGGAGCATTAAAGCAAATGGGAG
CTACTAACATGGGATTAGATGAAGATGAACTTCAAGGACTCGTTGATAGTTGGAGATTGGCTAACCCTAATATAACCAGA
TTTTGGAAAACTGTTGAAAAATCTGCAATAAACGCTGTTAAAGGCATAGCGTCTATCATAGATAAAGGTATAAAATTTAA
GAGAGAGGATGGGATATTATTTATAACCCTTCCATCTGGTAGGAGATTAGCATATGTAAAACCCCGAATTGTATTAAATA
GCTTTGGCAGTGAATCTATAGCTTATAATGGGGTAAATGGAACAACCAAAGTTTGGGAAGAGATCGAAACCTACGGGGGA
AAGCTTGTTGAAAATATTGTACAAGCAGTGGCAAGAGATTGCTTAGCAGAGAGTATTAAAAGATTACATAAGAGAGGGTA
TAGGATAATATTCCACGTGCATGATGAGGTTATCCTCGAATCTGATAAAGATATTAAAGTTGAAGATATAGAGAGTATTA
TGGCTGAGCCTATTAAGTGGGCAGAAGGTTTAAATTTAAGTGCTGCTGGATTCGAAGCAGATTTTTATAAAAAAGATTAA

Protein sequence :
MRTLAIDIETYSDIDIKKAGVYAYAGSTAFTILLFAYRYDDEEVKLIDLTETKTLPQSIIDDLINPNIIKTAYNANFERV
CLSKFLNIKLPIDDWRCTAVQASMLGLPNNLKDVAKVLNLESQKDSKGTRLINYFSVPYKGQRRMPSEDIIKWEEFKSYC
IQDVKVESAIRDRLSKYPISDSEQELYIIDQIINDRGIKVDEVFVDNAIRFDAIHTDICKQAFNELTGGVNPKSSTQIKE
YLINRGLKVSNVDKSTIADIIKDTDDKGLKQILDLKLKLGKTSVKKYEAMKRCTCSDGRIRGLLQFYGANRTGRWAGRLV
QVHNLPQNHLDNLEDVRGLIVNGDYDLLEMLYDNIPDVLSQLIRTAFIPSEGKKFIVCDFSAIEARVIAYLADEKWRIDV
FNTHGKIYEASAAQMFKVPIESITKSSPLRQKGKIAELALGYGGSVGALKQMGATNMGLDEDELQGLVDSWRLANPNITR
FWKTVEKSAINAVKGIASIIDKGIKFKREDGILFITLPSGRRLAYVKPRIVLNSFGSESIAYNGVNGTTKVWEEIETYGG
KLVENIVQAVARDCLAESIKRLHKRGYRIIFHVHDEVILESDKDIKVEDIESIMAEPIKWAEGLNLSAAGFEADFYKKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2073 YP_002747288.1 phage DNA polymerase Not tested ¥ÕSeq4 Protein 1e-142 50
MW1425 NP_646242.1 DNA polymerase Not tested ¥ÕSa2 Protein 1e-141 49
polA YP_494120.1 phage related DNA polymerase family A Not tested ¥ÕSa2 Protein 5e-141 49