Gene Information

Name : SPPN_04025 (SPPN_04025)
Accession : YP_004768103.1
Strain : Streptococcus pseudopneumoniae IS7493
Genome accession: NC_015875
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 762422 - 763123 bp
Length : 702 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGAAGCAACTAATTAGTCTAAAAAATATCTGCAGAAGCTATCGCAATGGTGACCAAGAACTGCAGGTTCTCAAAAACAT
CAATCTAGAAGTGAATGAGGGTGAATTTGTTGCCATCATGGGACCATCTGGTTCTGGGAAGTCCACTCTGATGAATACGA
TTGGCATGTTGGATACACCAACCAGTGGAGAGTATTATCTTGAAGGCCAAGAAGTGGCTGGACTGGGTGAAAAACAATTA
GCCAAGGTTCGTAACCAACAAATCGGTTTTGTCTTTCAGCAGTTCTTTCTTCTATCGAAGCTCAATGCTCTGCAAAATGT
AGAATTGCCCTTGATTTACGCAGGAGTTTCGTCTTCAAAACGGCGCAAGTTGGCTGAGGAGTATTTAGACAAGGTTGAAT
TGACAGAACGTAGTCACCATTTGCCTTCGGAATTATCTGGTGGTCAAAAGCAACGTGTGGCTATTGCTCGTGCCTTGGTA
AACAATCCTTCTATTATCCTAGCGGACGAACCGACAGGAGCCTTGGATACCAAAACAGGGAATCAAATTATGCAACTATT
GGTTGACTTGAACAAAGAAGGAAAAACCATTATCATGGTAACGCATGAGCCTGAGATTGCTGCCTATGCTAAACGTCAGA
TTATCATTCGAGATGGAGTCATTTCATCTGACAGTGCTCAGTTAGGAAAGGAGGAAAACTAA

Protein sequence : 
MKQLISLKNICRSYRNGDQELQVLKNINLEVNEGEFVAIMGPSGSGKSTLMNTIGMLDTPTSGEYYLEGQEVAGLGEKQL
AKVRNQQIGFVFQQFFLLSKLNALQNVELPLIYAGVSSSKRRKLAEEYLDKVELTERSHHLPSELSGGQKQRVAIARALV
NNPSIILADEPTGALDTKTGNQIMQLLVDLNKEGKTIIMVTHEPEIAAYAKRQIIIRDGVISSDSAQLGKEEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-37 43
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 2e-32 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-35 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-38 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-38 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-38 41
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 7e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPPN_04025 YP_004768103.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-105 99
SPPN_04025 YP_004768103.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-48 47
SPPN_04025 YP_004768103.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 7e-44 46
SPPN_04025 YP_004768103.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-35 43