Gene Information

Name : SPPN_04005 (SPPN_04005)
Accession : YP_004768099.1
Strain : Streptococcus pseudopneumoniae IS7493
Genome accession: NC_015875
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 758325 - 758948 bp
Length : 624 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGACAATTGACCTTTTGAACGTTTCAAAAAGTTTCGGCTCAAAGAAGATCTTTACAGACTTAAATTTAATATTTGAATC
TGGAAAAAGCTATGCATTGATTGGAGGTTCTGGCTCCGGTAAAAGTACCCTTCTTAATATTATAGGAAGATTAGAAAAAA
TTGACAGTGGGAATGTTTTAGTTGATAAACAAGATATTTGGAAGATAAAAGAAAGAACTTTTTTTAAAAATACTGTTGGA
TATGTATTTCAGAATTATTCTTTAATAGATAACAAAACAGTATATGATAATCTGAGCCTTATCACTAAAGACAAAAAAAC
AATAACTGACGTACTTGAAAAAGTAGGACTGTCAAGTGACTATTTACATCAAAAAATATACGAATTGTCTGGTGGGCAGG
CTCAACGTGTAGCTATTGCCAGAATGTTAATGAAACCACGTAAAATTATTTTAGCAGATGAGCCCACAGGAGCTTTAGAT
GGTGAGATTGGAAAAGAAATCATTCGTTTGTTATTAAATGAAAAAGATGAAGACAAATATGTTATAATAGCGACGCATGA
TCCAGCTGTCTATAACGAAGTTGATGTGATCATTGATATGAAAGATATAGGGTATAAGGTATGA

Protein sequence : 
MTIDLLNVSKSFGSKKIFTDLNLIFESGKSYALIGGSGSGKSTLLNIIGRLEKIDSGNVLVDKQDIWKIKERTFFKNTVG
YVFQNYSLIDNKTVYDNLSLITKDKKTITDVLEKVGLSSDYLHQKIYELSGGQAQRVAIARMLMKPRKIILADEPTGALD
GEIGKEIIRLLLNEKDEDKYVIIATHDPAVYNEVDVIIDMKDIGYKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-28 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPPN_04005 YP_004768099.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 7e-29 41