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Name : lysS (SPPN_03605) Accession : YP_004768021.1 Strain : Streptococcus pseudopneumoniae IS7493 Genome accession: NC_015875 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 685265 - 686755 bp Length : 1491 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGTCAACAGAACATATGGAAGAACTAAATGACCAGCAGATCGTTCGCCGTGAAAAAATGGCTGCGCTCCGTGAACAAGG AATCGATCCCTTTGGAAAACGCTTTGAACGCACTGCAAATTCACAAGAATTAAAAGATAAATTTGCTGACCTTGATAAAG AACAATTACATGATAAAAACGAAACAGCTACTATCGCAGGACGCTTGGTAACCAAACGTGGTAAAGGTAAAGTAGGTTTT GCCCACCTTCAAGACCGCGAAGGCCAAATCCAGATCTACGTTCGTAAGGATGCTGTCGGTGAAGAAAACTACGAAATCTT CAAAAAAGCAGACCTTGGTGACTTCCTTGGTGTCGAAGGCGAAGTGATGCGTACAGATATGGGAGAACTCTCTATCAAGG CTATTCACATCACACACTTGTCTAAGGCTCTTCGTCCTCTACCAGAGAAATTCCATGGTTTGACAGACGTTGAAACAATT TACCGTAAACGTTACCTTGACTTGATTTCTAACCGTGAAAGCTTTGAACGCTTTGTCACTCGTTCAAAAATCATCTCTGA AATCCGTCGTTACCTTGACCAAAAAGGTTTCCTTGAAGTGGAAACACCTGTTCTTCACAACGAAGCTGGTGGTGCCTCTG CCCGTCCATTTATCACCCACCACAATGCCCAAAACATTGACATGGTGCTTCGTATCGCGACTGAGCTTCACTTGAAACGC CTTATCGTGGGTGGTATGGAACGCGTCTATGAAATTGGCCGTATCTTCCGTAACGAAGGAATGGATGCTACTCACAACCC TGAGTTCACTTCTATCGAAGTCTACCAAGCTTATGCTGACTTCCAAGACATCATGGACTTGACGGAAGGCATTATCCAAC ATGCTGCTAAATCAGTTAAAGGCGACGGCCCAGTCAATTACCAAGGAACTGAAATCAAAATCAACGAACCATTCAAACGT GTTCACATGGTGGATGCTATCAAAGAAATTACTGGTGTCGATTTCTGGCAAGACATGACTTTGGAAGAAGCCAAAGCTAT CGCTGCTGAGAAGAAAGTTCCAGTTGAGAAACACTACACTGAAGTTGGCCACATCATCAATGCCTTCTTTGAAGAGTTTG TTGAAGAAACCTTGATCCAACCAACCTTTGTATATGGACATCCAGTAGCTGTATCTCCACTGGCTAAGAAAAATCCTGAA GACCAACGCTTTACTGACCGTTTCGAGCTCTTCATCATGACTAAGGAGTACGGCAATGCCTTTACTGAGCTCAACGACCC AATCGATCAGCTTAGCCGTTTTGAAGCCCAAGCTAAAGCCAAAGAACTTGGTGACGATGAAGCGACAGGCATCGACTACG ACTACATCGAAGCCCTTGAATATGGTATGCCACCAACAGGTGGTTTGGGAATCGGTATCGACCGTCTCTGCATGCTCCTC ACGGATACAACTACTATCCGTGATGTATTGCTCTTCCCAACAATGAAATAA Protein sequence : MSTEHMEELNDQQIVRREKMAALREQGIDPFGKRFERTANSQELKDKFADLDKEQLHDKNETATIAGRLVTKRGKGKVGF AHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDFLGVEGEVMRTDMGELSIKAIHITHLSKALRPLPEKFHGLTDVETI YRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGASARPFITHHNAQNIDMVLRIATELHLKR LIVGGMERVYEIGRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFKR VHMVDAIKEITGVDFWQDMTLEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPE DQRFTDRFELFIMTKEYGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLL TDTTTIRDVLLFPTMK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-107 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004768021.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-107 | 46 |
