Gene Information

Name : SPPN_11185 (SPPN_11185)
Accession : YP_004769499.1
Strain : Streptococcus pseudopneumoniae IS7493
Genome accession: NC_015875
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2145186 - 2147618 bp
Length : 2433 bp
Strand : -
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGAACTATTCAAAAGCATTGAATGAATGTATCGAAAGTGCCTACATGGTTGCTGGACATTTTGGAGCTCGTTATCTAGA
GTCTTGGCACTTGTTGATTGCCATGTCTAATCACAGTTATAGTGTAGCAGGGGCAACTTTAAATGATTATCCGTATGAGA
TGGACCGTTTAGAAGAGGTGGCTTTGGAACTGACTGAAACGGACTATAGCCAGGATGAAACTTTTACGGAATTGCCGTTC
TCCCGTCGTTTGCAGATTCTTTTTGACGAAGCAGAGTATGTAGCTTCAGTGGTCCATGCTAAGGTGCTAGGGACAGAGCA
CGTCCTCTATGCGATTTTGCATGATGGCAATGCCTTGGCGACTCGTATTTTGGAGAGGGCTGGTTTTTCTTATGAAGACA
AGAAAGATCAGGTCAAGATTGCTGCTCTTCGTCGAAATTTAGAAGAACGGGCAGGTTGGACTCGTGAAGACCTCAAGGCT
TTACGTCAACGCCATCGTACTGTGGCTGACAAACAAAATTCTATGGCCAATATGATGGGCATGCCGCAGACTCCGAGTGG
TGGTCTCGAGGACTATACGCATGATTTGACAGAGCAAGCGCGTTCTGGCAAGTTAGAACCAGTCATCGGTCGGGATAAGG
AAATCTCGCGTATGATTCAAATCTTGAGCCGTAAGACTAAGAACAACCCTGTCTTGGTCGGGGATGCTGGTGTCGGGAAA
ACAGCTCTGGCGCTTGGTCTTGCCCAGCGTATTGCTAGTGGTGATGTACCTGCGGAAATGGCTAAGATGCGCGTGTTGGA
GCTTGATTTGATGAATGTCGTTGCAGGTACACGTTTCCGTGGTGACTTTGAAGAGCGTATGAATAATATCATCAAGGATA
TTGAGGAAGATGGCCAAGTAATTCTCTTTATCGATGAACTCCACACTATCATGGGTTCTGGTAGCGGGATTGACTCGACT
CTGGATGCGGCCAATATTTTGAAGCCAGCCTTGGCGCGTGGAACTTTGAGAACGGTTGGTGCCACCACTCAGGAAGAATA
CCAAAAACACATCGAAAAAGATGCGGCCCTTTCTCGTCGATTCGCTAAAGTGACGATTGAAGAGCCAAGTGTGGCAGACA
GCATGGCCATTTTGCAAGGCTTGAAGGCGACTTATGAGAAACATCACCGTGTGCAAATCACAGATGAAGCGGTCGAAACA
GCCGTTAAGATGGCCCATCGTTACTTGACTAGTCGCCATTTGCCAGACTCTGCTATAGACCTCTTAGATGAAGCAGCAGC
AACAGTGCAAAATAAGGCTAAGCATGTAAAAGTAGACGATTCAGGCTTGAGTCCAGCTGACAAGGCCTTGATGGATGGCA
AGTGGAAACAGGCAGCTCAGCTAATCGCAAAAGAAGAGCAAGTGCCTGTCTATAAAGACTTGGTAACAGAGTCTGATATT
TTGACTACCTTGAGTCGATTGTCAGGTATCCCAGTCCAAAAACTGACTCAGACTGACGCTAAGAAATACCTGAACTTGGA
AGCTGAACTACACAAGCGTGTCATCGGTCAAGATCAAGCAGTTTCAAGCGTTAGCCGTGCTATTCGCCGCAATCAGTCAG
GGATTCGCAGTCACAAGCGTCCGATTGGTTCTTTTATGTTCCTAGGACCCACAGGTGTCGGGAAGACCGAATTGGCCAAG
GCTTTGGCAGAAGTTCTCTTTGATGACGAATCAGCCCTTATCCGCTTTGATATGAGTGAGTATATGGAGAAATTTGCAGC
CAGCCGTCTCAATGGAGCTCCTCCGGGTTATGTGGGTTATGAAGAAGGTGGGGAGTTGACCGAGAAGGTTCGCAACAAAC
CCTATTCCGTTCTCCTTTTTGACGAGGTAGAGAAGGCCCACCCAGATATCTTTAATGTGCTCTTGCAGGTCTTGGATGAT
GGTGTCTTGACCGATAGCAAGGGCCGCAAGGTTGACTTTTCAAATACCATTATCATCATGACGTCAAACCTTGGTGCGAC
AGCCCTTCGGGATGACAAGACCGTCGGTTTTGGAGCTAAGGATATTCGTTTTGACCAGGAAAATATGGAAAAACGCATGT
TTGAAGAGCTGAAAAAGGCTTATAGACCTGAGTTTATCAACCGTATTGATGAAAAGGTGGTCTTCCATAGCCTGTCTAGT
GACCATATGCAGGAAGTGGTGAAGATTATGGTCAAACCTTTAGTGGCAAGTTTGGCTGAAAAAGGCATTGACTTGAAATT
ACAAGCTTCCGCACTGAAATTGTTGGCAAATCAAGGATATGACCCAGAGATGGGAGCTCGTCCACTTCGCAGAACCCTGC
AAACAGAAGTGGAAGACAAGTTGGCAGAACTTCTTCTTAAGGGAGATTTGGTGGCAGGCAGCACACTTAAGATTGGTGTC
AAAGCAGGCCAGTTAAAATTTGATATTGCATAA

Protein sequence :
MNYSKALNECIESAYMVAGHFGARYLESWHLLIAMSNHSYSVAGATLNDYPYEMDRLEEVALELTETDYSQDETFTELPF
SRRLQILFDEAEYVASVVHAKVLGTEHVLYAILHDGNALATRILERAGFSYEDKKDQVKIAALRRNLEERAGWTREDLKA
LRQRHRTVADKQNSMANMMGMPQTPSGGLEDYTHDLTEQARSGKLEPVIGRDKEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPAEMAKMRVLELDLMNVVAGTRFRGDFEERMNNIIKDIEEDGQVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVTIEEPSVADSMAILQGLKATYEKHHRVQITDEAVET
AVKMAHRYLTSRHLPDSAIDLLDEAAATVQNKAKHVKVDDSGLSPADKALMDGKWKQAAQLIAKEEQVPVYKDLVTESDI
LTTLSRLSGIPVQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSVSRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAK
ALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDD
GVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSS
DHMQEVVKIMVKPLVASLAEKGIDLKLQASALKLLANQGYDPEMGARPLRRTLQTEVEDKLAELLLKGDLVAGSTLKIGV
KAGQLKFDIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-141 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPPN_11185 YP_004769499.1 ATPase VFG0079 Protein 3e-161 47
SPPN_11185 YP_004769499.1 ATPase VFG0080 Protein 5e-125 44