Gene Information

Name : SPPN_08055 (SPPN_08055)
Accession : YP_004768897.1
Strain : Streptococcus pseudopneumoniae IS7493
Genome accession: NC_015875
Putative virulence/resistance : Virulence
Product : manganese ABC transporter substrate-binding lipoprotein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 1551160 - 1552089 bp
Length : 930 bp
Strand : +
Note : COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin

DNA sequence :
ATGAAAAAATTAGGTACATTACTCGTTCTCTTTCTTTCCGTCATTGCTCTTGTAGCATGTGCTAGCGGAAAAAAAGATAC
AGCTTCTGGTCAAAAACTAAAAGTTGTTGCTACAAACTCAATCATTGCTGATATTACTAAAAATATTGCTGGTGACAAGA
TTGATCTTCACAGTATCGTTCCGATTGGGCAAGACCCACACGAATACGAACCACTTCCTGAAGATGTTAAGAAAACTTCT
GAGGCAGACCTCATTTTCTATAACGGTATCAACCTTGAAACAGGTGGCAATGCTTGGTTTACAAAATTGGTAGAAAATGC
TAAGAAAACTGAAAACAAAGACTACTTTGCAGTCAGCGAAGGCGTTGATGTCATCTACCTTGAAGGAAAAAATGAAAAAG
GTAAAGAAGACCCACACGCTTGGCTCAACCTTGAAAATGGGATTATCTTTGCTAAAAATATCGCCAAACAATTGAGTGCT
AAAGATCCTAACAACAAGGAATTCTATGAAAAAAATCTCAAAGAATATACTGATAAGTTAGACAAACTTGATAAAGAAAG
TAAGGATAAATTTACTAAGATCCCTGCTGAAAAGAAACTCATTGTAACCAGCGAAGGAGCATTCAAATACTTCTCTAAAG
CCTATGGTGTCCCAAGTGCTTACATCTGGGAAATCAATACTGAAGAAGAAGGAACACCTGAACAAATCAAGACCTTGGTT
GAAAAACTTCGCCAAACAAAAGTTCCATCACTCTTTGTAGAATCAAGTGTGGATGACCGTCCAATGAAGACTGTTTCACA
AGACACAAACATCCCAATCTACGCACAAATCTTTACTGACTCTATCGCAGAACAAGGTAAAGAAGGTGACAGCTACTACA
GCATGATGAAATACAACCTTGATAAAATTGCTGAAGGATTGGCAAAATAA

Protein sequence :
MKKLGTLLVLFLSVIALVACASGKKDTASGQKLKVVATNSIIADITKNIAGDKIDLHSIVPIGQDPHEYEPLPEDVKKTS
EADLIFYNGINLETGGNAWFTKLVENAKKTENKDYFAVSEGVDVIYLEGKNEKGKEDPHAWLNLENGIIFAKNIAKQLSA
KDPNNKEFYEKNLKEYTDKLDKLDKESKDKFTKIPAEKKLIVTSEGAFKYFSKAYGVPSAYIWEINTEEEGTPEQIKTLV
EKLRQTKVPSLFVESSVDDRPMKTVSQDTNIPIYAQIFTDSIAEQGKEGDSYYSMMKYNLDKIAEGLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 3e-104 78
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 2e-104 78

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPPN_08055 YP_004768897.1 manganese ABC transporter substrate-binding lipoprotein VFG1359 Protein 3e-130 98
SPPN_08055 YP_004768897.1 manganese ABC transporter substrate-binding lipoprotein VFG2165 Protein 2e-81 58
SPPN_08055 YP_004768897.1 manganese ABC transporter substrate-binding lipoprotein VFG2157 Protein 2e-76 54