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Name : MELS_1354 (MELS_1354) Accession : YP_004766402.1 Strain : Megasphaera elsdenii DSM 20460 Genome accession: NC_015873 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1484685 - 1487117 bp Length : 2433 bp Strand : + Note : - DNA sequence : ATGATGAACAATCGTCTCACCAATGATGCCAAAGCTGTCCTGCAGTATGCGCAGGAAGCGGCACAAAAATTCCACCATGA TTACGTCGGGACCGAACATATCCTACTCGGTCTCGTTCTCAATACAGACGGCATTGCCGGCCTGCTCCTCAACCAGTTGG GCCTGACGCCGGAAAATGTCACCCGCGCCATCGAACAGCACGTCGGCTGGGGACAGGATACGCCGTCGAAACTGCGCCTG ACGCCGCGGACGAAGCGGGCCATGGAACTGGCCGTCCGCGAAGCCAACCGACTGGAACAGAACTATGTCGGCACGGAACA CATGCTGGCCGGCATCCTCGAAGAAGGGAGCGGCATGGCCGTCCAGATCCTGGAAGATATGGACATCGACCCGGACCTCG TCTCCCAACGCCTGAGTGAACTCATGAACGACCCGGCCGTCGAAGGCGGCGACGCCGTGGCTGCCAAGAACGGCAGCGAC TTGTCCCAGTTCGGCCGTGATCTCAATGAATGGGCCAAGAAGGGCAAAATCGACCCGGTCATCGGCCGGGAAAAGGAAAT CAGCCGGGTCATCCAGATCCTCAGCCGCCGGACCAAGAACAATCCGGTCCTCATCGGCGCACCTGGCGTCGGCAAGACGG CCATTGCCGAAGGCCTGGCCCAGCGCATCATCAACGGCAACGTGCCTGACAGCCTGCTGGACAAGCGCATTTTCTCCCTC GACCTGGCCAGCATCGTTGCCGGTACCAAGTACCGCGGCGAATTTGAAGAACGGATCAAGCGCATCCTCGACGTCATCGA ACAGGACGATACCATCATCCTCTTCATCGACGAAATCCACCAGCTCATCGGCGCCGGTGCCGTCGAAGGGGCCATGGATG CAGCCAATATCCTCAAACCGGCCCTGGCCCGGGGCGACCTGCAGTGCATCGGCGCTACGACCATCGACGAATACAAGAAA CACTTTGAAAAAGATGCCGCTCTGGCCCGCCGTTTCCAGCCCGTCCTGGTCGGCGAACCGACGGAAGACGACGCCATGGC CATCCTCTTCGGCCTGCGCGACCGCTACGAAGCCTTCCACAAGGCCCGTATCACGGACGACGCCGTAAGAGCCGCCGTCA AATTGTCGGCACGGTACATTTCCGACCGCTATCTGCCGGACAAGGCCATCGACGTCATGGACGAAGCGGCAGCCCGCGTC CGCATGAAGGTCTACGCGCCGTCCCATGAACTCCAGGACCTGGAACAGAAACTGGCTGATATCAATAAAGAAAAAGAAGC GGCCCTGGCTGGGGAAGACTTCGAAAAATGCGCGTCCCTCCGCGATGCCGGCAAGAAGGTATCATCGGAAATCTCGGCTC TTCAAAAAGAAAAGAAACAGCACGACGATGAAAAACTCGTCGTCACGGAAAACGACATTGCCGACGTCGTGTCCATGTGG ACAGGCGTCCCGGTCCAGCAAATTACAGAAACGGAATCGCAGCGCCTCCTTCACTTAGAAGAAGAACTGCATAAACGGGT CATCAGCCAGGATGACGCCGTCACGGCCGTAGCTAAAGCCGTCCGCCGGGCCCGAGCCGGCCTCAAGGATGCCAACCGCC CCATCGGTTCCTTCCTCTTCCTTGGTCCGTCCGGTGTCGGCAAGACCGAACTGGCCCGGACCCTGGCCGCCCAGCTCTTC GGCAGTGCCGACAACATGATCCGCATCGACATGAGCGAATTTATGGAAAAATACAGTGTCTCCCGCCTGGTCGGCGCCCC TCCGGGCTATGTCGGCTATGAAGAAGGGGGCGAATTGACCGACGCAGTTCGGGAAAAACCGTACAGTGTCATCCTCTTCG ACGAAGTGGAAAAGGCCAGCAGCGACTTCTTCAACCTGCTCCTGCAGGTCCTCGACGAAGGCCGCCTGACTGACTCCAAA GGCCGGACCGTCGATTTCCGCAATACCGTCATCATCATGACCAGCAATCTCGGCGCATCGCACCTCAAACCGTCGGGCCC GGTCATGGGCTTCTCGACGGGCGGCGACAGTGCCAAGGACCGGGAAGCGTCTTTCGAAGTCGCCAAGAAGGAAATCATGG CCGATGTGAAACGCTTCTTCCGTCCGGAATTTCTCAACCGTATCGACGAAATCATCGTCTTCAAGCCGCTGGAACAGAAA GACCTGCGCCAGATCGTCGACATCCTGCTCCAGGACCTGACGAAACGCCTTGGCGAAAAAGGCGTGGCCATGGATTGGAC GACGGCCGCCGACGACATCCTCGTCAAAGAAGGCACGGACTTTGCCTATGGCGCCCGGCCGTTGAAACGGGCCATCCAGA AGCTCGTCGAAGACCCGATTTCGGAAATGCTCCTCAGCGGCGACGTCAAGGACGGCAATACGATCCACGTCGACAGTTTG GACAAGAAGAAACTCGTCTTTACGACGGAGTAA Protein sequence : MMNNRLTNDAKAVLQYAQEAAQKFHHDYVGTEHILLGLVLNTDGIAGLLLNQLGLTPENVTRAIEQHVGWGQDTPSKLRL TPRTKRAMELAVREANRLEQNYVGTEHMLAGILEEGSGMAVQILEDMDIDPDLVSQRLSELMNDPAVEGGDAVAAKNGSD LSQFGRDLNEWAKKGKIDPVIGREKEISRVIQILSRRTKNNPVLIGAPGVGKTAIAEGLAQRIINGNVPDSLLDKRIFSL DLASIVAGTKYRGEFEERIKRILDVIEQDDTIILFIDEIHQLIGAGAVEGAMDAANILKPALARGDLQCIGATTIDEYKK HFEKDAALARRFQPVLVGEPTEDDAMAILFGLRDRYEAFHKARITDDAVRAAVKLSARYISDRYLPDKAIDVMDEAAARV RMKVYAPSHELQDLEQKLADINKEKEAALAGEDFEKCASLRDAGKKVSSEISALQKEKKQHDDEKLVVTENDIADVVSMW TGVPVQQITETESQRLLHLEEELHKRVISQDDAVTAVAKAVRRARAGLKDANRPIGSFLFLGPSGVGKTELARTLAAQLF GSADNMIRIDMSEFMEKYSVSRLVGAPPGYVGYEEGGELTDAVREKPYSVILFDEVEKASSDFFNLLLQVLDEGRLTDSK GRTVDFRNTVIIMTSNLGASHLKPSGPVMGFSTGGDSAKDREASFEVAKKEIMADVKRFFRPEFLNRIDEIIVFKPLEQK DLRQIVDILLQDLTKRLGEKGVAMDWTTAADDILVKEGTDFAYGARPLKRAIQKLVEDPISEMLLSGDVKDGNTIHVDSL DKKKLVFTTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MELS_1354 | YP_004766402.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 55 |
| MELS_1354 | YP_004766402.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0080 | Protein | 5e-142 | 51 |
