Gene Information

Name : MELS_0133 (MELS_0133)
Accession : YP_004765183.1
Strain : Megasphaera elsdenii DSM 20460
Genome accession: NC_015873
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 151216 - 152727 bp
Length : 1512 bp
Strand : -
Note : -

DNA sequence :
ATGTCGGATACGAAAGAAAAAGAAACGCCTATTATTGAAGAAGAAAAATTGAATGACCAAATGAAGGTCCGCCGCGAAAA
GATGCAGGAATTTATCGACGCCGGCGTCTATCCCTTCGGTCAGAAATACAACTGGGATCATCATGCACAGGAAGTCAAGG
ATGACGCTGCAGAACTGGAAAAGAATGAAACCGTCGTCAGTGTCGCCGGCCGCCTCATGGCTATCCGCCGCCACGGCAAG
ACGGCTTTCTGCGTCCTTCGCGATTTGAGTGGTGAAATCCAGCTCTATTTCCGTAAAGATGTTCTCGGTGAAGAATCATA
TACCTTATTCAAACTCCTCGATATCGGTGATATCGTCGGCATCGAAGGGACGGTCTTCGTTACTCATACCGGTGAAACGA
CGATCCGCGTCGAAAAATGGACCCTCTTGTCCAAATCCCTCCGCCCGCTGCCGGAAAAATTCCATGGCCTGACGGACAAG
GAAACGCGTTATCGTCAGCGTTACCTCGACCTCATCGTCAACCCGGAAGTCAAAGATACCTTCATCAAACGGTCGAAGAT
CATCAAAGGCATCCGCAAATACCTCGACGACCGTCATTTCCTGGAAGTTGAAACGCCGATGCTCCATACCATTGCCGGCG
GCGCGGCTGCCCGTCCGTTCAAGACGCATCACAACGCCCTCGATATGGACATTTATCTGCGCATCGCTCCGGAACTCCAC
CTCAAACGCCTCCTCGTCGGCGGCTTGGAACGAGTCTATGAAATGAACCGCTGCTTCCGCAACGAAGGCATCGACACGCG
GCACAATCCGGAATTTACGACGGTTGAATTGTACCAGGCTTACGGCGACTTGGAAGATGTCATCAACATCACTGAAGACA
TGGTTTCCAAACTGGCTGAAATGCTCTATGGCACGATGAAATTGACCTATATCGACAAAGAAATCGACCTCACGCCGCCT
TGGGACCGCATGACCATGATCGAAGCGGTCAAGAAATTCAGCGGTGCTGACTTCGAAGGCATTACAGACGTCGAAACAGC
CCGCAAGATGGCTGACGAACATGACGTCGAATACGGCCAGTTCGATGGCGTCGGCAAGATTATCAACGCTTTCTTTGAAA
AATTCGTCGAAGAAAACCTCATCCAGCCGACCATCATCACCGGTCATCCCCTGGAAATTTCGCCGCTCACCAAACAGGAC
CGCGATAATCCGCTCCTGACTTATCGTTTCGAAGCCTTTATCTACGGCCGTGAACTGGCAAACGGTTTCTCGGAATTGAA
TGACCCCATCGACCAGCGTAACCGCTTCATCGAACAGATGAAAGAACGGGAACGCGGCGATGACGAAGCGCATCAGATGG
ATGAAGACTACTGCCGCGCTCTGGAATACGGCCTGCCTCCGACAGGCGGCTTGGGCATTGGCATTGACCGCCTGGTCATG
TTCCTGACCAACAGCCCGTCCATCCGCGACGTCCTTCTCTTCCCGTTGAGCCGTCCGGAACAGCATAAATAA

Protein sequence :
MSDTKEKETPIIEEEKLNDQMKVRREKMQEFIDAGVYPFGQKYNWDHHAQEVKDDAAELEKNETVVSVAGRLMAIRRHGK
TAFCVLRDLSGEIQLYFRKDVLGEESYTLFKLLDIGDIVGIEGTVFVTHTGETTIRVEKWTLLSKSLRPLPEKFHGLTDK
ETRYRQRYLDLIVNPEVKDTFIKRSKIIKGIRKYLDDRHFLEVETPMLHTIAGGAAARPFKTHHNALDMDIYLRIAPELH
LKRLLVGGLERVYEMNRCFRNEGIDTRHNPEFTTVELYQAYGDLEDVINITEDMVSKLAEMLYGTMKLTYIDKEIDLTPP
WDRMTMIEAVKKFSGADFEGITDVETARKMADEHDVEYGQFDGVGKIINAFFEKFVEENLIQPTIITGHPLEISPLTKQD
RDNPLLTYRFEAFIYGRELANGFSELNDPIDQRNRFIEQMKERERGDDEAHQMDEDYCRALEYGLPPTGGLGIGIDRLVM
FLTNSPSIRDVLLFPLSRPEQHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 3e-96 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MELS_0133 YP_004765183.1 lysyl-tRNA synthetase VFG1668 Protein 2e-96 49