Gene Information

Name : Rh054_06630 (Rh054_06630)
Accession : YP_004764860.1
Strain : Rickettsia heilongjiangensis 054
Genome accession: NC_015866
Putative virulence/resistance : Unknown
Product : seryl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0172
EC number : -
Position : 1130033 - 1131310 bp
Length : 1278 bp
Strand : +
Note : COG0172 Seryl-tRNA synthetase

DNA sequence :
ATGTTAAATATCAAATGGATTAGAGAAAATAAAGAATTGTTCGATGAAAAGCTTAGCCAAAGATTTATTGAACCTATGTC
TAGTAAAATTGCTATGCTCGACGGAGAGAAAAGAAAAATTACGAGTTTAATTCAAGAATTTCAGCATGCACGTAAGGTAA
AATCAAAGATTTTAGGTAATATGGCCTCTAAAAGCGGCGAAGAGTTTGAAGGGTTACAAAGAGATGTCAAACATATAAAT
GAGAAGTTGGAAGCACTTGAACAGGATCTAAATAATAATAACGAATTAAATGAACTATTAAATATGTTTCCTAATATTCC
GGACGAAGAAGTACCTTACGGAATGGATGAAAGTATGAATAAATTAGTTCGTACTTACGGAGAGACAAATCCAAATGCTT
TGAATAAACAGCATTTTGAATTAGGTATAAAATTAAATTTAATGGATTTTGAACAAACTGCTAAAATTTCTGGAACTAGA
TTTGTAACGTTAAAAGGTGATTTAGCAAAGCTAGAACGTGCTTTAATTAATTTTATGGTTGATGTTCATACTAAAGAGTG
GGATTTCTTTGAGATATCACCTCCGGTATTAGTGCGAGATAATGCTATGTATAATGCAGGACAACTACCTAAATTTGCCG
AAGAGTCTTTTGTAACAACCAATGGTTACAGACTAATTCCAACCGCAGAAGTATCTTTAATAAATATAGTCGCCGATACT
ATTATACCAAGAGAAAAATTACCGATGCGTTATGTTGCTTACACCCCGTGCTTTAGATCAGAAGCAGGTAGTAGCGGTAG
AGATACAAGAGGTATGATTAGATTACATCAGTTCGGTAAAGTTGAGCTAGTATCTATTACTACCCCTGAAGAATCAAAAA
ATGAGCATGAATATATAACTAATGCATCAGAGACTATTTTACAAAAACTGAATCTTCCTTATCGTGTTATGTTACTTTGC
ACCGGAGATATGGGATTTGCGGCAAAAAAAACCTATGATATAGAAGTATGGCTTCCGGGACAAAAGCAATATCGTGAAAT
TGCTAGCTGTTCTAATTGTGGAGATTTTCAAGCACGTAGAATGAAAGCAAGATATAAAGAATTCGGCAGTAACGAAACTA
CCTTAGTTCATACTTTAAATGCTTCAGGATTACCTATCGGAAGAACTATGGTTGCAATACTTGAAAATTATCAGAATGAA
GATGGCTCAATAACTATACCGGATGTCTTGATAAATTACATGGGAGGATTACAAAAAATCACTGCCTATAGTGAATAA

Protein sequence :
MLNIKWIRENKELFDEKLSQRFIEPMSSKIAMLDGEKRKITSLIQEFQHARKVKSKILGNMASKSGEEFEGLQRDVKHIN
EKLEALEQDLNNNNELNELLNMFPNIPDEEVPYGMDESMNKLVRTYGETNPNALNKQHFELGIKLNLMDFEQTAKISGTR
FVTLKGDLAKLERALINFMVDVHTKEWDFFEISPPVLVRDNAMYNAGQLPKFAEESFVTTNGYRLIPTAEVSLINIVADT
IIPREKLPMRYVAYTPCFRSEAGSSGRDTRGMIRLHQFGKVELVSITTPEESKNEHEYITNASETILQKLNLPYRVMLLC
TGDMGFAAKKTYDIEVWLPGQKQYREIASCSNCGDFQARRMKARYKEFGSNETTLVHTLNASGLPIGRTMVAILENYQNE
DGSITIPDVLINYMGGLQKITAYSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
serS YP_003446791.1 seryl-tRNA synthetase Not tested The aminoglycoside resistance gene cluster Protein 4e-79 45