Gene Information

Name : GQS_00740 (GQS_00740)
Accession : YP_004761728.1
Strain : Thermococcus sp. 4557
Genome accession: NC_015865
Putative virulence/resistance : Resistance
Product : copper-translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 158548 - 160470 bp
Length : 1923 bp
Strand : +
Note : COG2217 Cation transport ATPase

DNA sequence :
ATGGAGGACTTCAAGAAGCGCTTTGTAGTCTCCGTGATACTGACGGTTCCGATTCTGATTCTGTCCCCGCTGATACAGGA
CTTCTTCGGCTTCGAGCTGACCTTCCCGGGAGACCGCTACGTTCTCTTTGGACTTTCCGCGGTGGTGTACTTCTACGGCG
GCTGGCCGTTCCTGAAGGGCATGGGGGACGAGCTGAAGAAAAAGTTACCCGGAATGATGACGCTGATAGCGCTGGCAATC
ACGGTTGCCTTCTTCTACAGCACCGCGGTAACCTTCGGCCTGTCCGGAAAAACCTTCTACTGGGAACTGGCAACGCTTAT
TGACATCATGCTTATCGGACATTACATAGAGATGCGCTCCGTCCTCGGAGCTTCAAGGGCACTTGAGGAGCTCATAAAGC
TCATGCCCACCGAGGCGCACCTCGTAACGCCCGAAGGGGTGAAGGATGTCCCGGTCAGTGAGCTGAAGAAGGGCGACGTG
GTTCTGGTCAAGCCCGGCGAGAAGATACCCTCCGACGGCATCGTTGTCGAGGGGGAAACGAGCGTCAACGAGGCGATGCT
CACCGGCGAATCGAAGCCCGTCTACAGGAAGCCTGGGGACGGTGTCATAGGCGGTTCCATAAACCTCGAGGGCGCGATAA
AGGTCCGGATAGAGAAGACCGGAAAGGACACCTACCTGATGCAGGTCGTTGAGCTCGTCAGGCAGGCGCAGGAGACGAGG
TCAAAAACGCAGGATCTGGCGAACAGGGCGGCTTTCTACCTCACGCTCATAGCCATAACCGCTGGAACGGTAACGCTTGG
AGTGTGGCTCTACATCGGCAAGCCCTTCGTCTTCGCCCTTGAGAGGATGGTTACAGTGATGGTCATAACCTGTCCCCACG
CCCTCGGCCTGGCCGTCCCGCTGGTCGTCTCTGTCTCGACCTCGCTGTCGGCGAAGAAGGGAATCCTCATCAGGAACAGA
GAGGCCTTTGAGAGGGCGAAGGATGTGAAGGTGGTCGTCTTCGATAAGACCGGAACGCTGACAGAAGGGAAGTTTGAGGT
GACCGAGGTAATACCCCTCGATGAGCTCGGCGAGGAGGATGTGCTGAGATACGCCGCCGCCCTCGAAGCCCACTCAAACC
ACCCGATAGCCCAGGGGATAGTGGAGAGAACAGAGGAACTCGGCCTTGATCCCTATAAGGTTAGGGAGTCGAAGGTCCTG
CCCGGTAAGGGCGTCCAGGGCGTCATCAACGGCAAAGAAGTCCTCGTTGTGAGCCCCGGCTTCCTGAAGGAAAACGGCCT
GTGGAGGGAGGACGAGCGCGTTAAGGAGGTTCTTGAGCAGGGTAAGACGGTGGTCTTCCTTGTAATCGACGGCAAGCTCG
TTGGCGCTTTGGCACTGGCGGATAGGATAAGGCCCGAATCGAGGGAGGCCGTGAAGAGGCTCCACGAGATGGGCATAAAG
GCCTACATGCTCACCGGCGACAACGCCAAGGTTGCAAAGTGGGTTGCTGAGGAGCTCGGCCTCGACGGCTTCTTCGCCGA
AGTCCTGCCCCATCAGAAGTCAGAAAAGATAGTTGAACTCCAGAAGCAGGGGTTGGTCGTTGCGATGGTTGGCGACGGCA
TAAACGACGCTCCAGCTTTGATTCAGGCCGATGTCGGGATAGCCATTGGAGCGGGAACCGACGTGGCGATAGAGAGCGCC
GACATAATCCTCGTCAAGAACGACCCTAGGGACGTTATAACCGGGGTACACCTCGCTAAGGCAACCTACAGGAAGATGGT
GCAGAACCTGGCCTGGGCGACTGGCTACAACACCTTCGCGATTCCCCTGGCGGCAGGTGTGCTATACAGCTACGGAATCC
TTCTCAGCCCCGCCCTCGGTGCCCTGCTGATGAGCATGAGCACGGTAATAGTGGCAATAAACGCGAGGTTCCTGAAGGTT
TGA

Protein sequence :
MEDFKKRFVVSVILTVPILILSPLIQDFFGFELTFPGDRYVLFGLSAVVYFYGGWPFLKGMGDELKKKLPGMMTLIALAI
TVAFFYSTAVTFGLSGKTFYWELATLIDIMLIGHYIEMRSVLGASRALEELIKLMPTEAHLVTPEGVKDVPVSELKKGDV
VLVKPGEKIPSDGIVVEGETSVNEAMLTGESKPVYRKPGDGVIGGSINLEGAIKVRIEKTGKDTYLMQVVELVRQAQETR
SKTQDLANRAAFYLTLIAITAGTVTLGVWLYIGKPFVFALERMVTVMVITCPHALGLAVPLVVSVSTSLSAKKGILIRNR
EAFERAKDVKVVVFDKTGTLTEGKFEVTEVIPLDELGEEDVLRYAAALEAHSNHPIAQGIVERTEELGLDPYKVRESKVL
PGKGVQGVINGKEVLVVSPGFLKENGLWREDERVKEVLEQGKTVVFLVIDGKLVGALALADRIRPESREAVKRLHEMGIK
AYMLTGDNAKVAKWVAEELGLDGFFAEVLPHQKSEKIVELQKQGLVVAMVGDGINDAPALIQADVGIAIGAGTDVAIESA
DIILVKNDPRDVITGVHLAKATYRKMVQNLAWATGYNTFAIPLAAGVLYSYGILLSPALGALLMSMSTVIVAINARFLKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 6e-93 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GQS_00740 YP_004761728.1 copper-translocating P-type ATPase BAC0629 Protein 0.0 69
GQS_00740 YP_004761728.1 copper-translocating P-type ATPase BAC0079 Protein 2e-131 48
GQS_00740 YP_004761728.1 copper-translocating P-type ATPase BAC0383 Protein 8e-105 43
GQS_00740 YP_004761728.1 copper-translocating P-type ATPase BAC0101 Protein 2e-89 42